ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	HSF-02	heat stress transcription factor 2
gma-r.7	HSF-02	heat stress transcription factor 2
gma-u.5	HSF-33	heat stress transcription factor 33
gma-u.5	HSF-04	heat stress transcription factor 4
gma-u.5	HSF-24	heat stress transcription factor 24
mtr-u.5	11420553	heat shock factor protein HSF8
mtr-u.5	11444444	heat stress transcription factor A-1e
ppo-u.5	7465635	heat stress transcription factor A-1e
ppo-u.5	18094138	heat stress transcription factor A-1d
ppo-u.5	7491874	heat shock factor protein HSF8
ath-u.5	HSFA1E	heat shock transcription factor A1E
ath-u.5	HSF1	heat shock factor 1
ath-u.5	HSF3	heat shock factor 3
bra-r.6	103843941	heat stress transcription factor A-1e
bra-r.6	103851069	heat stress transcription factor A-1b
bra-r.6	103846292	heat stress transcription factor A-1b
vvi-u.5	100243710	heat shock factor protein HSF8
vvi-u.5	100254514	heat stress transcription factor A-1b
ghi-r.1	107923678	heat shock factor protein HSF8-like
ghi-r.1	107920141	heat stress transcription factor A-1b
ghi-r.1	121212514	heat stress transcription factor A-1b
bna-r.1	106447601	heat stress transcription factor A-1e
bna-r.1	125587550	heat stress transcription factor A-1e-like
bna-r.1	106438957	heat stress transcription factor A-1e-like
cit-r.1	102624148	heat shock factor protein HSF8-like
cit-r.1	102625917	heat stress transcription factor A-1e
sly-u.5	101246442	heat stress transcription factor A-1b-like
sly-u.5	101258888	heat shock factor protein HSF8
sly-u.5	101259923	heat stress transcription factor A-1
sot-r.1	102591896	heat shock factor protein HSF8
sot-r.1	102579124	heat shock factor protein HSF8
sot-r.1	102584067	heat stress transcription factor A-1b-like
nta-r.1	107765812	heat stress transcription factor A-1b
nta-r.1	107766726	heat shock factor protein HSF8-like
nta-r.1	107788773	heat stress transcription factor A-1b
zma-u.5	100273077	uncharacterized LOC100273077
zma-u.5	100274485	uncharacterized LOC100274485
tae-r.2	123123949	heat stress transcription factor A-1
tae-r.2	123114421	heat stress transcription factor A-1
tae-r.2	123087506	heat stress transcription factor A-1
hvu-r.1	123395197	heat stress transcription factor A-1-like
sbi-r.1	8060849	heat stress transcription factor A-1
bdi-r.1	100846148	heat stress transcription factor A-1

Top 50 coexpressed genes to HSF-02 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to HSF-02 (gma-u.5 coexpression data)

CoexMap"100815121"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0034605 [list] [network] cellular response to heat	(62 genes)	IEA
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II	(844 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(5531 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(449 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(2313 genes)	IEA

Protein

NP_001340351.1 [sequence] [blastp]
XP_014622410.1 [sequence] [blastp]
XP_040861390.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for NP_001340351.1)
nucl 10	(predict for XP_014622410.1)
nucl 10	(predict for XP_040861390.1)

Subcellular
localization
TargetP

other 7, chlo 4	(predict for NP_001340351.1)
other 7, chlo 4	(predict for XP_014622410.1)
other 7, chlo 4	(predict for XP_040861390.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for HSF-02	gma-r.7 for HSF-02	gma-u.5 for HSF-33	gma-u.5 for HSF-04	gma-u.5 for HSF-24	mtr-u.5 for 11420553	mtr-u.5 for 11444444	ppo-u.5 for 7465635	ppo-u.5 for 18094138	ppo-u.5 for 7491874	ath-u.5 for HSFA1E	ath-u.5 for HSF1	ath-u.5 for HSF3	bra-r.6 for 103843941	bra-r.6 for 103851069	bra-r.6 for 103846292	vvi-u.5 for 100243710	vvi-u.5 for 100254514	ghi-r.1 for 107923678	ghi-r.1 for 107920141	ghi-r.1 for 121212514	bna-r.1 for 106447601	bna-r.1 for 125587550	bna-r.1 for 106438957	cit-r.1 for 102624148	cit-r.1 for 102625917	sly-u.5 for 101246442	sly-u.5 for 101258888	sly-u.5 for 101259923	sot-r.1 for 102591896	sot-r.1 for 102579124	sot-r.1 for 102584067	nta-r.1 for 107765812	nta-r.1 for 107766726	nta-r.1 for 107788773	zma-u.5 for 100273077	zma-u.5 for 100274485	tae-r.2 for 123123949	tae-r.2 for 123114421	tae-r.2 for 123087506	hvu-r.1 for 123395197	sbi-r.1 for 8060849	bdi-r.1 for 100846148

Ortholog

Ortholog ID: 1663

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

zma

tae

hvu

sbi

bdi

Symbol

HSF-02

HSF-24

HSF-17

HSFA1E

HSF1

HSF3

HsfA1a

Function^*

heat stress transcription factor 2

heat stress transcription factor 24

heat stress transcription factor 17

heat shock factor protein HSF8

heat stress transcription factor A-1e

heat stress transcription factor A-1d

heat shock factor protein HSF8

heat shock transcription factor A1E

heat shock factor 1

heat shock factor 3

heat stress transcription factor A-1e

heat shock factor protein HSF8

heat stress transcription factor A-1b

heat shock factor protein HSF8-like

heat stress transcription factor A-1e-like

heat stress transcription factor A-1b

heat stress transcription factor A-1d

heat shock factor protein HSF8-like

heat stress transcription factor A-1e

heat shock factor protein HSF8