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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100815371   plant-specific TFIIB-related protein 1 
 gma-r.7   100815371   plant-specific TFIIB-related protein 1 
 gma-m.5   100815371   plant-specific TFIIB-related protein 1 
 gma-u.5   102662353   plant-specific TFIIB-related protein 1 
 mtr-u.5   11411099   plant-specific TFIIB-related protein 1 
 ppo-u.5   7473161   plant-specific TFIIB-related protein 1 
 ath-u.5   PBRP   plant-specific TFIIB-related protein 
 vvi-u.5   100256546   plant-specific TFIIB-related protein 1 
 sly-u.5   101254048   transcription initiation factor IIB 
 osa-u.5   4331943   plant-specific TFIIB-related protein 1 
 zma-u.5   542022   uncharacterized LOC542022 

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Top 50 coexpressed genes to 100815371 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100815371 (gma-u.5 coexpression data)

CoexMap"100815371"


gmaLOC100815371 | Entrez gene ID : 100815371      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03022 [list] [network] Basal transcription factors (90 genes)
GO BP
GO:0070897 [list] [network] transcription preinitiation complex assembly  (37 genes)  IEA  
GO:0006352 [list] [network] DNA-templated transcription initiation  (123 genes)  IEA  
GO CC
GO:0097550 [list] [network] transcription preinitiation complex  (15 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0017025 [list] [network] TBP-class protein binding  (21 genes)  IEA  
Protein XP_014619363.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  cyto_nucl 2,  cysk 1  (predict for XP_014619363.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_014619363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100815371

.
gma-r.7
for
100815371

.
gma-m.5
for
100815371

.
gma-u.5
for
102662353

.
mtr-u.5
for
11411099

.
ppo-u.5
for
7473161

.
ath-u.5
for
PBRP

.
vvi-u.5
for
100256546

.
sly-u.5
for
101254048

.
osa-u.5
for
4331943

.
zma-u.5
for
542022

.


Ortholog ID: 10905
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PBRP LOC100815371 LOC102662353 LOC101254048 LOC4331943 LOC542022 LOC103862482 LOC100256546 LOC7473161 LOC11411099 LOC123098395 LOC123093125 LOC123449434 LOC107913059 LOC107896268 BNAA03G53510D LOC106410760 LOC8054252 LOC102599427 LOC102620952 LOC100835667 LOC107765888 LOC107781075
Function* plant-specific TFIIB-related protein plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 transcription initiation factor IIB plant-specific TFIIB-related protein 1 uncharacterized LOC542022 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 transcription initiation factor IIB hypothetical protein plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1 plant-specific TFIIB-related protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 3
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03420 Nucleotide excision repair 2
sly03013 Nucleocytoplasmic transport 2
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
zma03082 ATP-dependent chromatin remodeling 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu04712 Circadian rhythm - plant 2
hvu00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829817 100815371 102662353 101254048 4331943 542022 103862482 100256546 7473161 11411099 123098395 123093125 123449434 107913059 107896268 106451971 106410760 8054252 102599427 102620952 100835667 107765888 107781075
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