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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816628   probable prolyl 4-hydroxylase 9 
 gma-r.7   100816628   probable prolyl 4-hydroxylase 9 
 gma-u.5   100776115   probable prolyl 4-hydroxylase 9 
 mtr-u.5   11410838   probable prolyl 4-hydroxylase 9 
 mtr-u.5   11408557   probable prolyl 4-hydroxylase 9 
 ppo-u.5   7465063   probable prolyl 4-hydroxylase 9 
 ppo-u.5   18101136   probable prolyl 4-hydroxylase 9 
 ppo-u.5   7469623   probable prolyl 4-hydroxylase 9 
 ath-u.5   AT4G33910   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 vvi-u.5   100266991   probable prolyl 4-hydroxylase 9 
 vvi-u.5   100256084   probable prolyl 4-hydroxylase 9 
 vvi-u.5   100244673   probable prolyl 4-hydroxylase 9 
 sly-u.5   101244153   probable prolyl 4-hydroxylase 9 
 sly-u.5   101254254   probable prolyl 4-hydroxylase 9 
 osa-u.5   4334196   probable prolyl 4-hydroxylase 9 
 zma-u.5   100283657   uncharacterized LOC100283657 

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Top 50 coexpressed genes to 100816628 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816628 (gma-u.5 coexpression data)

CoexMap"100816628"


gmaLOC100816628 | Entrez gene ID : 100816628      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 1 3 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00330 [list] [network] Arginine and proline metabolism (121 genes)
GO BP
GO:0018401 [list] [network] peptidyl-proline hydroxylation to 4-hydroxy-L-proline  (25 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (889 genes)  IEA  
GO MF
GO:0004656 [list] [network] procollagen-proline 4-dioxygenase activity  (25 genes)  IEA  
GO:0031418 [list] [network] L-ascorbic acid binding  (31 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (508 genes)  IEA  
Protein XP_003539300.1 [sequence] [blastp]
XP_025980150.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  nucl 1,  plas 1,  vacu 1,  nucl_plas 1,  cyto_E.R. 1  (predict for XP_003539300.1)
chlo 1,  nucl 1,  cyto 1,  mito 1,  extr 1,  vacu 1,  cyto_nucl 1,  chlo_mito 1  (predict for XP_025980150.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_003539300.1)
scret 6  (predict for XP_025980150.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816628

.
gma-r.7
for
100816628

.
gma-u.5
for
100776115

.
mtr-u.5
for
11410838

.
mtr-u.5
for
11408557

.
ppo-u.5
for
7465063

.
ppo-u.5
for
18101136

.
ppo-u.5
for
7469623

.
ath-u.5
for
AT4G33910

.
vvi-u.5
for
100266991

.
vvi-u.5
for
100256084

.
vvi-u.5
for
100244673

.
sly-u.5
for
101244153

.
sly-u.5
for
101254254

.
osa-u.5
for
4334196

.
zma-u.5
for
100283657

.


Ortholog ID: 4347
Species ath sly sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre cre sbi sot sot cit cit bdi nta nta
Symbol AT4G33910 LOC101254254 LOC101244153 LOC4334196 LOC100283657 LOC103834453 LOC100256084 LOC100244673 LOC7469623 LOC7465063 LOC11410838 LOC11408557 LOC123105116 LOC123113408 LOC123452359 LOC107894313 LOC107913268 LOC106361059 LOC106361086 CHLRE_03g179500v5 CHLRE_10g424900v5 LOC8085904 LOC102596044 LOC102591988 LOC102613795 LOC102615941 LOC100832694 LOC107826193 LOC107781220
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 uncharacterized LOC100283657 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 uncharacterized protein uncharacterized protein probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 probable prolyl 4-hydroxylase 9 putative prolyl 4-hydroxylase 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly04144 Endocytosis 2
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00514 Other types of O-glycan biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 3
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 7
ppo04626 Plant-pathogen interaction 4
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae04075 Plant hormone signal transduction 3
tae00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03060 Protein export 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04626 Plant-pathogen interaction 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04626 Plant-pathogen interaction 4
bna00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 5
sbi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 4
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 6
nta03272 Virion - Hepatitis viruses 3
nta03250 Viral life cycle - HIV-1 2
nta00330 Arginine and proline metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829535 101254254 101244153 4334196 100283657 103834453 100256084 100244673 7469623 7465063 11410838 11408557 123105116 123113408 123452359 107894313 107913268 106361059 106361086 5728802 5728201 8085904 102596044 102591988 102613795 102615941 100832694 107826193 107781220
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