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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816881   uncharacterized LOC100816881 
 gma-r.7   100816881   uncharacterized LOC100816881 
 gma-m.5   100816881   uncharacterized LOC100816881 
 gma-u.5   100779639   ycf3-interacting protein 1, chloroplastic 
 mtr-u.5   11445313   ycf3-interacting protein 1, chloroplastic 
 ppo-u.5   7477779   ycf3-interacting protein 1, chloroplastic 
 ath-u.5   CEST   death domain associated protein 
 bra-r.6   103827883   ycf3-interacting protein 1, chloroplastic 
 vvi-u.5   100267182   ycf3-interacting protein 1, chloroplastic 
 ghi-r.1   107908529   ycf3-interacting protein 1, chloroplastic 
 ghi-r.1   107938532   ycf3-interacting protein 1, chloroplastic 
 bna-r.1   106390961   ycf3-interacting protein 1, chloroplastic 
 bna-r.1   106436802   ycf3-interacting protein 1, chloroplastic 
 cit-r.1   102614778   ycf3-interacting protein 1, chloroplastic 
 sly-u.5   101259586   ycf3-interacting protein 1, chloroplastic 
 sot-r.1   102597753   ycf3-interacting protein 1, chloroplastic-like 
 nta-r.1   107817932   ycf3-interacting protein 1, chloroplastic-like 
 nta-r.1   107804858   ycf3-interacting protein 1, chloroplastic-like 
 osa-u.5   4327627   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic-like 
 zma-u.5   100275005   uncharacterized LOC100275005 
 tae-r.2   123071073   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 tae-r.2   123062302   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 tae-r.2   123079437   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 hvu-r.1   123444614   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 sbi-r.1   8082392   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 bdi-r.1   100835197   protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic 
 cre-r.1   CHLRE_06g280650v5   uncharacterized protein 

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Top 50 coexpressed genes to 100816881 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816881 (gma-u.5 coexpression data)

CoexMap"100816881"


gmaLOC100816881 | Entrez gene ID : 100816881      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080183 [list] [network] response to photooxidative stress  (7 genes)  IEA  
GO:0048564 [list] [network] photosystem I assembly  (15 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO MF
Protein NP_001241562.1 [sequence] [blastp]
XP_040866131.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  golg 1  (predict for NP_001241562.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_040866131.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001241562.1)
chlo 9  (predict for XP_040866131.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816881
gma-r.7
for
100816881
gma-m.5
for
100816881
gma-u.5
for
100779639
mtr-u.5
for
11445313
ppo-u.5
for
7477779
ath-u.5
for
CEST
bra-r.6
for
103827883
vvi-u.5
for
100267182
ghi-r.1
for
107908529
ghi-r.1
for
107938532
bna-r.1
for
106390961
bna-r.1
for
106436802
cit-r.1
for
102614778
sly-u.5
for
101259586
sot-r.1
for
102597753
nta-r.1
for
107817932
nta-r.1
for
107804858
osa-u.5
for
4327627
zma-u.5
for
100275005
tae-r.2
for
123071073
tae-r.2
for
123062302
tae-r.2
for
123079437
hvu-r.1
for
123444614
sbi-r.1
for
8082392
bdi-r.1
for
100835197
cre-r.1
for
CHLRE_06g280650v5


Ortholog ID: 10359
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100816881 LOC100779639 LOC11445313 LOC7477779 CEST LOC103827883 LOC100267182 LOC107908529 LOC107938532 LOC106390961 LOC106436802 LOC102614778 LOC101259586 LOC102597753 LOC107817932 LOC107804858 LOC4327627 LOC100275005 LOC123071073 LOC123062302 LOC123079437 LOC123444614 LOC8082392 LOC100835197 CHLRE_06g280650v5
Function* uncharacterized LOC100816881 ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic death domain associated protein ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic ycf3-interacting protein 1, chloroplastic-like ycf3-interacting protein 1, chloroplastic-like ycf3-interacting protein 1, chloroplastic-like protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic-like uncharacterized LOC100275005 protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic protein CHLOROPLAST ENHANCING STRESS TOLERANCE, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00260 Glycine, serine and threonine metabolism 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna00480 Glutathione metabolism 2
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 7
cit00710 Carbon fixation by Calvin cycle 6
cit00010 Glycolysis / Gluconeogenesis 3
cit00620 Pyruvate metabolism 2
cit00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly03010 Ribosome 3
sly00710 Carbon fixation by Calvin cycle 3
sly00480 Glutathione metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816881 100779639 11445313 7477779 834494 103827883 100267182 107908529 107938532 106390961 106436802 102614778 101259586 102597753 107817932 107804858 4327627 100275005 123071073 123062302 123079437 123444614 8082392 100835197 5720915
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