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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816953   uncharacterized LOC100816953 
 gma-r.7   100816953   uncharacterized LOC100816953 
 gma-m.5   100816953   uncharacterized LOC100816953 
 mtr-u.5   25483858   uncharacterized LOC25483858 
 ppo-u.5   7454240   uncharacterized LOC7454240 
 ath-u.5   AT1G19485   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100852537   uncharacterized LOC100852537 
 sly-u.5   101256910   uncharacterized LOC101256910 
 osa-u.5   9269796   uncharacterized LOC9269796 
 zma-u.5   103650985   Transducin/WD40 repeat-like superfamily protein 

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Top 50 coexpressed genes to 100816953 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816953 (gma-u.5 coexpression data)

CoexMap"100816953"


gmaLOC100816953 | Entrez gene ID : 100816953      
Species gma mtr ppo ath vvi sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (50 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (13 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006588830.1 [sequence] [blastp]
XP_040861608.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006588830.1)
nucl 6,  chlo 1,  cyto 1,  extr 1,  pero 1,  golg 1,  chlo_mito 1,  cyto_pero 1  (predict for XP_040861608.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006588830.1)
other 6  (predict for XP_040861608.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816953

.
gma-r.7
for
100816953

.
gma-m.5
for
100816953

.
mtr-u.5
for
25483858

.
ppo-u.5
for
7454240

.
ath-u.5
for
AT1G19485

.
vvi-u.5
for
100852537

.
sly-u.5
for
101256910

.
osa-u.5
for
9269796

.
zma-u.5
for
103650985

.


Ortholog ID: 7807
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G19485 LOC100816953 LOC101256910 LOC9269796 LOC103650985 LOC103835842 LOC103872752 LOC100852537 LOC7454240 LOC25483858 LOC123183150 LOC123062654 LOC123444844 LOC123450562 LOC107925902 LOC107944108 LOC106401809 LOC106440768 LOC8062105 LOC102605692 LOC102609984 LOC100830814 LOC107770968 LOC107774390
Function* Transducin/WD40 repeat-like superfamily protein uncharacterized LOC100816953 uncharacterized LOC101256910 uncharacterized LOC9269796 Transducin/WD40 repeat-like superfamily protein uncharacterized LOC103835842 uncharacterized LOC103872752 uncharacterized LOC100852537 uncharacterized LOC7454240 uncharacterized LOC25483858 uncharacterized LOC123183150 uncharacterized LOC123062654 uncharacterized LOC123444844 uncharacterized LOC123450562 uncharacterized LOC107925902 uncharacterized LOC107944108 general transcription factor 3C polypeptide 2 uncharacterized LOC106440768 uncharacterized LOC8062105 uncharacterized LOC102605692 uncharacterized LOC102609984 uncharacterized LOC100830814 uncharacterized LOC107770968 uncharacterized LOC107774390
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 4
sly03430 Mismatch repair 2
sly03440 Homologous recombination 2
sly03030 DNA replication 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03015 mRNA surveillance pathway 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta04977 Vitamin digestion and absorption 2
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838534 100816953 101256910 9269796 103650985 103835842 103872752 100852537 7454240 25483858 123183150 123062654 123444844 123450562 107925902 107944108 106401809 106440768 8062105 102605692 102609984 100830814 107770968 107774390
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