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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100811485   transcription factor bHLH162 
 ppo-u.5   7453762   transcription factor bHLH162 
 ath-u.5   AT4G20970   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G10585   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 sly-u.5   101248286   transcription factor bHLH162-like 
 sly-u.5   101247399   transcription factor bHLH162 
 osa-u.5   4326162   transcription factor bHLH168 
 osa-u.5   4326163   transcription factor bHLH168 
 zma-u.5   100272488   uncharacterized LOC100272488 

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Top 50 coexpressed genes to 100811485 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100811485 (gma-u.5 coexpression data)

CoexMap"100817883"


gmaLOC100817883 | Entrez gene ID : 100817883      
Species gma ppo ath sly osa zma sbi nta mtr cre bra cit vvi hvu bdi sot tae bna ghi
Paralog 1 1 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription regulator complex  (171 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (500 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
Protein XP_003540915.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_003540915.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003540915.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100811485

.
ppo-u.5
for
7453762

.
ath-u.5
for
AT4G20970

.
ath-u.5
for
AT1G10585

.
sly-u.5
for
101248286

.
sly-u.5
for
101247399

.
osa-u.5
for
4326162

.
osa-u.5
for
4326163

.
zma-u.5
for
100272488

.


Ortholog ID: 394
Species ath ath sly osa osa zma bra vvi ppo tae hvu hvu ghi sot cit bdi
Symbol AT4G20970 AT1G10585 LOC101248286 LOC4326162 LOC4326163 LOC100272488 LOC103858529 LOC100243748 LOC18104618 LOC123106062 LOC123449962 LOC123442337 LOC107887184 LOC102588456 LOC102624080 LOC100832319
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH162-like transcription factor bHLH168 transcription factor bHLH168 uncharacterized LOC100272488 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH162 transcription factor bHLH167 transcription factor bHLH168-like transcription factor bHLH168-like transcription factor bHLH162 uncharacterized LOC102588456 transcription factor bHLH162 transcription factor bHLH168
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00941 Flavonoid biosynthesis 5
ath00940 Phenylpropanoid biosynthesis 4
ath00360 Phenylalanine metabolism 2
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00460 Cyanoamino acid metabolism 2
ath00500 Starch and sucrose metabolism 2
ath00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 6
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00591 Linoleic acid metabolism 5
tae00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
hvu00591 Linoleic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827844 837600 101248286 4326162 4326163 100272488 103858529 100243748 18104618 123106062 123449962 123442337 107887184 102588456 102624080 100832319
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