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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100818278   adenine DNA glycosylase 
 gma-r.7   100818278   adenine DNA glycosylase 
 gma-m.5   100818278   adenine DNA glycosylase 
 mtr-u.5   25500763   adenine DNA glycosylase 
 ppo-u.5   112324058   adenine DNA glycosylase 
 ath-u.5   AT4G12740   HhH-GPD base excision DNA repair family protein 
 bra-r.6   103849063   adenine DNA glycosylase 
 vvi-u.5   100265491   adenine DNA glycosylase 
 ghi-r.1   107954018   adenine DNA glycosylase 
 ghi-r.1   107933999   adenine DNA glycosylase 
 bna-r.1   106385365   adenine DNA glycosylase-like 
 bna-r.1   106397715   adenine DNA glycosylase 
 cit-r.1   102622215   adenine DNA glycosylase 
 sly-u.5   101262147   adenine DNA glycosylase 
 sot-r.1   102598353   A/G-specific adenine DNA glycosylase 
 nta-r.1   107809776   adenine DNA glycosylase-like 
 nta-r.1   107781660   adenine DNA glycosylase-like 
 osa-u.5   9269803   adenine DNA glycosylase 
 zma-u.5   100284112   A/G-specific adenine DNA glycosylase 
 tae-r.2   123161434   adenine DNA glycosylase 
 tae-r.2   123148385   adenine DNA glycosylase 
 hvu-r.1   123411586   adenine DNA glycosylase 
 sbi-r.1   8084199   adenine DNA glycosylase 
 bdi-r.1   100830675   adenine DNA glycosylase 
 cre-r.1   CHLRE_02g082000v5   uncharacterized protein 

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Top 50 coexpressed genes to 100818278 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100818278 (gma-u.5 coexpression data)

CoexMap"100818278"


gmaLOC100818278 | Entrez gene ID : 100818278      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03410 [list] [network] Base excision repair (77 genes)
GO BP
GO:0006298 [list] [network] mismatch repair  (26 genes)  IEA  
GO:0006284 [list] [network] base-excision repair  (54 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000701 [list] [network] purine-specific mismatch base pair DNA N-glycosylase activity  (2 genes)  IEA  
GO:0032357 [list] [network] oxidized purine DNA binding  (2 genes)  IEA  
GO:0035485 [list] [network] adenine/guanine mispair binding  (2 genes)  IEA  
GO:0034039 [list] [network] 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity  (5 genes)  IEA  
Protein XP_003528811.1 [sequence] [blastp]
XP_006583255.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_003528811.1)
chlo 7,  plas 1,  mito 1,  extr 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_006583255.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_003528811.1)
chlo 9,  other 3  (predict for XP_006583255.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100818278
gma-r.7
for
100818278
gma-m.5
for
100818278
mtr-u.5
for
25500763
ppo-u.5
for
112324058
ath-u.5
for
AT4G12740
bra-r.6
for
103849063
vvi-u.5
for
100265491
ghi-r.1
for
107954018
ghi-r.1
for
107933999
bna-r.1
for
106385365
bna-r.1
for
106397715
cit-r.1
for
102622215
sly-u.5
for
101262147
sot-r.1
for
102598353
nta-r.1
for
107809776
nta-r.1
for
107781660
osa-u.5
for
9269803
zma-u.5
for
100284112
tae-r.2
for
123161434
tae-r.2
for
123148385
hvu-r.1
for
123411586
sbi-r.1
for
8084199
bdi-r.1
for
100830675
cre-r.1
for
CHLRE_02g082000v5


Ortholog ID: 9566
Species gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100818278 LOC25500763 LOC112324058 AT4G12740 LOC103849063 LOC100265491 LOC107954018 LOC107933999 LOC106385365 LOC106397715 LOC102622215 LOC101262147 LOC102598353 LOC107809776 LOC107781660 LOC9269803 LOC100284112 LOC123161434 LOC123148385 LOC123411586 LOC8084199 LOC100830675 CHLRE_02g082000v5
Function* adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase HhH-GPD base excision DNA repair family protein adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase-like adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase A/G-specific adenine DNA glycosylase adenine DNA glycosylase-like adenine DNA glycosylase-like adenine DNA glycosylase A/G-specific adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase adenine DNA glycosylase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03013 Nucleocytoplasmic transport 3
gma03410 Base excision repair 2
gma04144 Endocytosis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03440 Homologous recombination 3
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 5
vvi03410 Base excision repair 2
vvi03030 DNA replication 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04814 Motor proteins 3
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03430 Mismatch repair 2
nta03410 Base excision repair 2
nta03440 Homologous recombination 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta03460 Fanconi anemia pathway 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 4
tae03410 Base excision repair 4
tae03082 ATP-dependent chromatin remodeling 3
tae03030 DNA replication 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 7
tae03030 DNA replication 5
tae03420 Nucleotide excision repair 5
tae03430 Mismatch repair 5
tae03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 6
cre03410 Base excision repair 5
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100818278 25500763 112324058 826886 103849063 100265491 107954018 107933999 106385365 106397715 102622215 101262147 102598353 107809776 107781660 9269803 100284112 123161434 123148385 123411586 8084199 100830675 5727320
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