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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819005   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 gma-r.7   100819005   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 mtr-u.5   11407282   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ppo-u.5   18102652   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ath-u.5   FTSH12   FTSH protease 12 
 vvi-u.5   100244978   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 sly-u.5   101256833   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 

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Top 50 coexpressed genes to 100819005 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819005 (gma-u.5 coexpression data)

CoexMap"100819005"


gmaLOC100819005 | Entrez gene ID : 100819005      
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034982 [list] [network] mitochondrial protein processing  (15 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (30 genes)  IEA  
GO CC
GO:0005745 [list] [network] m-AAA complex  (5 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (62 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (107 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003530406.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  chlo 1  (predict for XP_003530406.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003530406.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819005

.
gma-r.7
for
100819005

.
mtr-u.5
for
11407282

.
ppo-u.5
for
18102652

.
ath-u.5
for
FTSH12

.
vvi-u.5
for
100244978

.
sly-u.5
for
101256833

.


Ortholog ID: 13489
Species ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol FTSH12 LOC100819005 LOC101256833 LOC103830476 LOC100244978 LOC18102652 LOC11407282 LOC107919911 LOC107895151 LOC106405638 LOC106353400 LOC102589653 LOC102626777 LOC107797813 LOC107807608
Function* FTSH protease 12 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844294 100819005 101256833 103830476 100244978 18102652 11407282 107919911 107895151 106405638 106353400 102589653 102626777 107797813 107807608
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