Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25498248   pentatricopeptide repeat-containing protein At1g06143 
 ath-u.5   AT1G06143   basic helix loop helix DNA-binding superfamily protein 
 bra-r.6   103843567   pentatricopeptide repeat-containing protein At1g06143 
 vvi-u.5   100264065   pentatricopeptide repeat-containing protein At1g06143 
 ghi-r.1   121204953   pentatricopeptide repeat-containing protein At1g06143 
 ghi-r.1   107915076   pentatricopeptide repeat-containing protein At1g06143 
 bna-r.1   125578644   pentatricopeptide repeat-containing protein At1g06143-like 
 bna-r.1   106419844   pentatricopeptide repeat-containing protein At1g06143-like 
 sly-u.5   101263971   pentatricopeptide repeat-containing protein At1g06143 

close


Top 50 coexpressed genes to 25498248 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 25498248 (mtr-u.5 coexpression data)

CoexMap"100819008"


gmaLOC100819008 | Entrez gene ID : 100819008      
Species mtr ath bra vvi ghi bna sly hvu tae sbi zma bdi cre ppo nta osa cit sot gma
Paralog 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014634980.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  pero 4,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_014634980.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_014634980.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25498248
ath-u.5
for
AT1G06143
bra-r.6
for
103843567
vvi-u.5
for
100264065
ghi-r.1
for
121204953
ghi-r.1
for
107915076
bna-r.1
for
125578644
bna-r.1
for
106419844
sly-u.5
for
101263971


Ortholog ID: 13238
Species mtr ath bra vvi ghi ghi bna bna sly
Symbol LOC25498248 AT1G06143 LOC103843567 LOC100264065 LOC121204953 LOC107915076 LOC125578644 LOC106419844 LOC101263971
Function* pentatricopeptide repeat-containing protein At1g06143 basic helix loop helix DNA-binding superfamily protein pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143 pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143-like pentatricopeptide repeat-containing protein At1g06143
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 25498248 28716441 103843567 100264065 121204953 107915076 125578644 106419844 101263971
The preparation time of this page was 0.1 [sec].