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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819195   probable polygalacturonase At1g80170 
 gma-r.7   100819195   probable polygalacturonase At1g80170 
 gma-m.5   100819195   probable polygalacturonase At1g80170 
 mtr-u.5   11433078   probable polygalacturonase At1g80170 
 ppo-u.5   7478117   probable polygalacturonase At1g80170 
 ath-u.5   PGAZAT   polygalacturonase ADPG2-like protein 
 ath-u.5   QRT2   Pectin lyase-like superfamily protein 
 bra-r.6   103870621   polygalacturonase QRT2-like 
 vvi-u.5   100255477   polygalacturonase 
 vvi-u.5   100257239   polygalacturonase 
 ghi-r.1   107918834   polygalacturonase QRT2 
 cit-r.1   PG   polygalacturonase 
 sot-r.1   102594305   probable polygalacturonase At1g80170 
 nta-r.1   107779855   probable polygalacturonase At1g80170 
 zma-u.5   103644217   polygalacturonase 
 zma-u.5   103644218   polygalacturonase ADPG1 
 tae-r.2   123143035   probable polygalacturonase At1g80170 
 hvu-r.1   123448060   probable polygalacturonase At1g80170 
 sbi-r.1   8061087   probable polygalacturonase At1g80170 
 bdi-r.1   100829282   uncharacterized LOC100829282 

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Top 50 coexpressed genes to 100819195 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819195 (gma-u.5 coexpression data)

CoexMap"100819195"


gmaLOC100819195 | Entrez gene ID : 100819195      
Species gma mtr ppo ath bra vvi ghi cit sot nta zma tae hvu sbi bdi cre sly osa bna
Paralog 3 1 1 2 1 2 1 1 1 1 2 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (1295 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (99 genes)  IEA  
Protein XP_003546932.2 [sequence] [blastp]
XP_014623666.1 [sequence] [blastp]
XP_014623667.1 [sequence] [blastp]
XP_014623668.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  extr 3,  E.R._vacu 3  (predict for XP_003546932.2)
extr 4,  vacu 3,  chlo 1,  E.R. 1,  golg 1,  chlo_mito 1  (predict for XP_014623666.1)
extr 4,  vacu 3,  chlo 1,  E.R. 1,  golg 1,  chlo_mito 1  (predict for XP_014623667.1)
nucl 6,  cysk 4  (predict for XP_014623668.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003546932.2)
scret 9  (predict for XP_014623666.1)
scret 9  (predict for XP_014623667.1)
other 8  (predict for XP_014623668.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819195
gma-r.7
for
100819195
gma-m.5
for
100819195
mtr-u.5
for
11433078
ppo-u.5
for
7478117
ath-u.5
for
PGAZAT
ath-u.5
for
QRT2
bra-r.6
for
103870621
vvi-u.5
for
100255477
vvi-u.5
for
100257239
ghi-r.1
for
107918834
cit-r.1
for
PG
sot-r.1
for
102594305
nta-r.1
for
107779855
zma-u.5
for
103644217
zma-u.5
for
103644218
tae-r.2
for
123143035
hvu-r.1
for
123448060
sbi-r.1
for
8061087
bdi-r.1
for
100829282


Ortholog ID: 458
Species mtr ppo ath ath bra vvi vvi ghi cit cit sly sly sot sot nta nta nta osa zma zma bdi
Symbol LOC11433078 LOC7478117 QRT2 AT1G80170 LOC103830105 LOC100243033 LOC100265326 LOC107950651 PG LOC102609776 LOC101264436 PG2 LOC102594305 LOC102585179 LOC107779855 LOC107805711 LOC107824130 LOC4339483 LOC103644217 LOC103644218 LOC100829282
Function* probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein polygalacturonase ADPG1 polygalacturonase polygalacturonase polygalacturonase QRT2 polygalacturonase polygalacturonase probable polygalacturonase At1g80170 polygalacturonase-2a probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 polygalacturonase-like polygalacturonase-2-like probable polygalacturonase At1g80170 polygalacturonase polygalacturonase ADPG1 uncharacterized LOC100829282
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath02010 ABC transporters 4
ath04981 Folate transport and metabolism 4
ath00561 Glycerolipid metabolism 2
ath00564 Glycerophospholipid metabolism 2
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath04517 IgSF CAM signaling 2
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
vvi00062 Fatty acid elongation 3
vvi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 4
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00904 Diterpenoid biosynthesis 3
sot00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 3
nta00562 Inositol phosphate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11433078 7478117 819988 844357 103830105 100243033 100265326 107950651 102578026 102609776 101264436 544051 102594305 102585179 107779855 107805711 107824130 4339483 103644217 103644218 100829282
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