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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819331   VIN3-like protein 2 
 gma-r.7   100819331   VIN3-like protein 2 
 gma-u.5   100820128   VIN3-like protein 2 
 gma-u.5   100794721   VIN3-like protein 2 
 gma-u.5   100785502   VIN3-like protein 3 
 mtr-u.5   11443783   VIN3-like protein 2 
 mtr-u.5   11433693   VIN3-like protein 2 
 ppo-u.5   7488961   VIN3-like protein 2 
 ppo-u.5   7467231   VIN3-like protein 2 
 ppo-u.5   18100497   VIN3-like protein 2 
 ath-u.5   VEL1   vernalization5/VIN3-like protein 
 vvi-u.5   100251391   VIN3-like protein 2 
 vvi-u.5   100266086   VIN3-like protein 2 
 sly-u.5   101257068   VIN3-like protein 2 
 sly-u.5   VIN3   vernalization insensitive 3 
 osa-u.5   4328327   VIN3-like protein 2 
 osa-u.5   4344961   VIN3-like protein 2 
 zma-u.5   103652991   VIN3-like protein 2 
 zma-u.5   100502265   uncharacterized LOC100502265 
 zma-u.5   100274676   uncharacterized LOC100274676 

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Top 50 coexpressed genes to 100819331 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819331 (gma-u.5 coexpression data)

CoexMap"100819331"


gmaLOC100819331 | Entrez gene ID : 100819331      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 1 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010048 [list] [network] vernalization response  (8 genes)  IEA  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (98 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003541436.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003541436.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003541436.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819331

.
gma-r.7
for
100819331

.
gma-u.5
for
100820128

.
gma-u.5
for
100794721

.
gma-u.5
for
100785502

.
mtr-u.5
for
11443783

.
mtr-u.5
for
11433693

.
ppo-u.5
for
7488961

.
ppo-u.5
for
7467231

.
ppo-u.5
for
18100497

.
ath-u.5
for
VEL1

.
vvi-u.5
for
100251391

.
vvi-u.5
for
100266086

.
sly-u.5
for
101257068

.
sly-u.5
for
VIN3

.
osa-u.5
for
4328327

.
osa-u.5
for
4344961

.
zma-u.5
for
103652991

.
zma-u.5
for
100502265

.
zma-u.5
for
100274676

.


Ortholog ID: 2835
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi nta nta
Symbol VEL1 LOC100785502 LOC100794721 VIN3 LOC101257068 LOC4344961 LOC4328327 LOC103652991 LOC100193423 LOC103852843 LOC103834685 LOC100266086 LOC100251391 LOC18100497 LOC7488961 LOC11443783 LOC11433693 LOC123169027 LOC123136328 LOC123403939 LOC107958674 LOC107919514 LOC106358544 LOC106411065 LOC8074646 LOC8085158 LOC102605824 LOC102598718 LOC102611668 LOC102615783 LOC100837188 LOC107793957 LOC107803958
Function* vernalization5/VIN3-like protein VIN3-like protein 3 VIN3-like protein 2 vernalization insensitive 3 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2 VIN3-like protein 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 4
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa00500 Starch and sucrose metabolism 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 2
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00410 beta-Alanine metabolism 3
nta00770 Pantothenate and CoA biosynthesis 3
nta00760 Nicotinate and nicotinamide metabolism 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 5
nta00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829143 100785502 100794721 101055574 101257068 4344961 4328327 103652991 100193423 103852843 103834685 100266086 100251391 18100497 7488961 11443783 11433693 123169027 123136328 123403939 107958674 107919514 106358544 106411065 8074646 8085158 102605824 102598718 102611668 102615783 100837188 107793957 107803958
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