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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   112416721   probable indole-3-pyruvate monooxygenase YUCCA8 
 mtr-u.5   11445283   probable indole-3-pyruvate monooxygenase YUCCA8 
 ath-u.5   YUC8   Flavin-binding monooxygenase family protein 
 ath-u.5   YUC5   Flavin-binding monooxygenase family protein 
 sly-u.5   101267265   probable indole-3-pyruvate monooxygenase YUCCA5 
 sly-u.5   FZY4   probable indole-3-pyruvate monooxygenase YUCCA8 
 osa-u.5   4343079   probable indole-3-pyruvate monooxygenase YUCCA5 
 osa-u.5   4334994   probable indole-3-pyruvate monooxygenase YUCCA5 
 zma-u.5   103646858   probable indole-3-pyruvate monooxygenase YUCCA9 
 zma-u.5   100281864   uncharacterized LOC100281864 
 zma-u.5   100281570   uncharacterized LOC100281570 

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Top 50 coexpressed genes to 112416721 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 112416721 (mtr-u.5 coexpression data)

CoexMap"100819987"


gmaLOC100819987 | Entrez gene ID : 100819987      
Species mtr ath sly osa zma ppo cre ghi cit vvi hvu bdi sot bra sbi tae nta gma bna
Paralog 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00380 [list] [network] Tryptophan metabolism (95 genes)
gmx04075 [list] [network] Plant hormone signal transduction (888 genes)
GO BP
GO:0009851 [list] [network] auxin biosynthetic process  (18 genes)  IEA  
GO CC
GO MF
GO:0004499 [list] [network] N,N-dimethylaniline monooxygenase activity  (31 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (100 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (249 genes)  IEA  
Protein XP_003554314.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 3,  nucl 1,  cyto 1,  extr 1,  cyto_nucl 1,  chlo_mito 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_003554314.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003554314.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
112416721

.
mtr-u.5
for
11445283

.
ath-u.5
for
YUC8

.
ath-u.5
for
YUC5

.
sly-u.5
for
101267265

.
sly-u.5
for
FZY4

.
osa-u.5
for
4343079

.
osa-u.5
for
4334994

.
zma-u.5
for
103646858

.
zma-u.5
for
100281864

.
zma-u.5
for
100281570

.


Ortholog ID: 1100
Species ath ath sly sly osa osa zma zma bra mtr hvu hvu ghi bna sbi sbi sot cit cit bdi nta nta
Symbol YUC3 YUC8 LOC101267265 FZY4 LOC4343079 LOC4334994 LOC100281864 LOC103646858 LOC103854158 LOC11445283 LOC123399706 LOC123431491 LOC107955258 LOC106359824 LOC8059733 LOC8065984 LOC102582086 LOC102625327 LOC102616113 LOC100839448 LOC107773517 LOC107810383
Function* YUCCA 3 Flavin-binding monooxygenase family protein probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 uncharacterized LOC100281864 probable indole-3-pyruvate monooxygenase YUCCA9 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA9 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA3 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8 putative indole-3-pyruvate monooxygenase YUCCA8 putative indole-3-pyruvate monooxygenase YUCCA9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
ath00380 Tryptophan metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00380 Tryptophan metabolism 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00380 Tryptophan metabolism 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 5
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00380 Tryptophan metabolism 4
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit00592 alpha-Linolenic acid metabolism 4
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
cit00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00250 Alanine, aspartate and glutamate metabolism 4
bdi00410 beta-Alanine metabolism 4
bdi00430 Taurine and hypotaurine metabolism 4
bdi00650 Butanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839474 828993 101267265 101260940 4343079 4334994 100281864 103646858 103854158 11445283 123399706 123431491 107955258 106359824 8059733 8065984 102582086 102625327 102616113 100839448 107773517 107810383
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