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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100820231   chaperone protein DnaJ 
 gma-r.7   100820231   chaperone protein DnaJ 
 gma-m.5   100820231   chaperone protein DnaJ 
 gma-u.5   100810900   protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic 
 gma-u.5   100804286   uncharacterized LOC100804286 
 mtr-u.5   11429948   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 ppo-u.5   7458435   uncharacterized LOC7458435 
 ppo-u.5   7468705   uncharacterized LOC7468705 
 ath-u.5   AT2G24860   DnaJ/Hsp40 cysteine-rich domain superfamily protein 
 vvi-u.5   100242360   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 sly-u.5   101246074   protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic 
 osa-u.5   4347100   uncharacterized LOC4347100 
 zma-u.5   100286100   tsi1-interacting protein TSIP1 

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Top 50 coexpressed genes to 100820231 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100820231 (gma-u.5 coexpression data)

CoexMap"100820231"


gmaLOC100820231 | Entrez gene ID : 100820231      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 5 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_014632780.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_014632780.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_014632780.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100820231

.
gma-r.7
for
100820231

.
gma-m.5
for
100820231

.
gma-u.5
for
100810900

.
gma-u.5
for
100804286

.
mtr-u.5
for
11429948

.
ppo-u.5
for
7458435

.
ppo-u.5
for
7468705

.
ath-u.5
for
AT2G24860

.
vvi-u.5
for
100242360

.
sly-u.5
for
101246074

.
osa-u.5
for
4347100

.
zma-u.5
for
100286100

.


Ortholog ID: 8884
Species ath gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G24860 LOC100820231 LOC101246074 LOC4347100 LOC100286100 LOC103864590 LOC100242360 LOC7458435 LOC7468705 LOC11429948 LOC123103838 LOC123112070 LOC123398592 LOC107906807 LOC111205420 LOC106394421 CHLRE_01g045650v5 LOC8060271 LOC102587635 LOC102616218 LOC100845027 LOC107789487 LOC107821297
Function* DnaJ/Hsp40 cysteine-rich domain superfamily protein chaperone protein DnaJ protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC4347100 tsi1-interacting protein TSIP1 uncharacterized LOC103864590 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic uncharacterized LOC7458435 uncharacterized LOC7468705 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic protein disulfide-isomerase LQY1, chloroplastic protein disulfide-isomerase LQY1, chloroplastic protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC107906807 uncharacterized LOC111205420 uncharacterized LOC106394421 uncharacterized protein protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC102587635 hypothetical protein protein disulfide-isomerase LQY1, chloroplastic uncharacterized LOC107789487 uncharacterized LOC107821297
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 3
ppo03020 RNA polymerase 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00860 Porphyrin metabolism 4
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta03250 Viral life cycle - HIV-1 2
nta00965 Betalain biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817023 100820231 101246074 4347100 100286100 103864590 100242360 7458435 7468705 11429948 123103838 123112070 123398592 107906807 111205420 106394421 5715668 8060271 102587635 102616218 100845027 107789487 107821297
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