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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824603   guanine nucleotide exchange factor subunit Rich 
 tae-r.2   123138763   guanine nucleotide exchange factor subunit Rich 
 tae-r.2   123145811   guanine nucleotide exchange factor subunit Rich 
 tae-r.2   123128679   guanine nucleotide exchange factor subunit RIC1 
 hvu-r.1   123406380   guanine nucleotide exchange factor subunit Rich-like 
 osa-u.5   9267267   uncharacterized LOC9267267 
 zma-u.5   103654191   guanine nucleotide exchange factor subunit RIC1 
 zma-u.5   103627831   guanine nucleotide exchange factor subunit Rich 
 sbi-r.1   8082702   guanine nucleotide exchange factor subunit Rich 
 ath-u.5   AT3G61480   Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 ath-u.5   AT5G28350   Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 ath-u.5   AT5G28442   quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 
 gma-u.5   100813760   guanine nucleotide exchange factor subunit RIC1 
 gma-u.5   100802342   guanine nucleotide exchange factor subunit RIC1 
 sly-u.5   101246379   uncharacterized LOC101246379 
 bra-r.6   103841970   RAB6A-GEF complex partner protein 1 
 vvi-u.5   100249848   uncharacterized LOC100249848 
 ppo-u.5   7497215   uncharacterized LOC7497215 
 ppo-u.5   7496988   uncharacterized LOC7496988 
 mtr-u.5   11439404   guanine nucleotide exchange factor subunit RIC1 
 ghi-r.1   107954533   guanine nucleotide exchange factor subunit RIC1 
 ghi-r.1   107955275   guanine nucleotide exchange factor subunit RIC1 
 bna-r.1   106415437   guanine nucleotide exchange factor subunit RIC1-like 
 bna-r.1   106415405   guanine nucleotide exchange factor subunit RIC1 
 sot-r.1   102578698   RAB6A-GEF complex partner protein 1-like 
 cit-r.1   102614502   uncharacterized LOC102614502 
 cit-r.1   127898615   uncharacterized LOC127898615 
 nta-r.1   107801917   uncharacterized LOC107801917 
 nta-r.1   107786678   uncharacterized LOC107786678 
 cre-r.1   CHLRE_12g506650v5   uncharacterized protein 

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Top 50 coexpressed genes to 100824603 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824603 (bdi-r.1 coexpression data)

CoexMap"100824603"


bdiLOC100824603 | Entrez gene ID : 100824603      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 2 1 3 2 1 1 1 2 1 2 2 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (19 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (251 genes)  IEA  
GO CC
GO:0034066 [list] [network] Ric1-Rgp1 guanyl-nucleotide exchange factor complex  (3 genes)  IEA  
GO:0000139 [list] [network] Golgi membrane  (98 genes)  IEA  
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010236164.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cysk_nucl 1,  plas 1,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_010236164.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_010236164.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824603
tae-r.2
for
123138763
tae-r.2
for
123145811
tae-r.2
for
123128679
hvu-r.1
for
123406380
osa-u.5
for
9267267
zma-u.5
for
103654191
zma-u.5
for
103627831
sbi-r.1
for
8082702
ath-u.5
for
AT3G61480
ath-u.5
for
AT5G28350
ath-u.5
for
AT5G28442
gma-u.5
for
100813760
gma-u.5
for
100802342
sly-u.5
for
101246379
bra-r.6
for
103841970
vvi-u.5
for
100249848
ppo-u.5
for
7497215
ppo-u.5
for
7496988
mtr-u.5
for
11439404
ghi-r.1
for
107954533
ghi-r.1
for
107955275
bna-r.1
for
106415437
bna-r.1
for
106415405
sot-r.1
for
102578698
cit-r.1
for
102614502
cit-r.1
for
127898615
nta-r.1
for
107801917
nta-r.1
for
107786678
cre-r.1
for
CHLRE_12g506650v5


Ortholog ID: 7634
Species bdi tae tae tae hvu osa zma zma sbi ath ath ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit cit nta nta cre
Symbol LOC100824603 LOC123138763 LOC123145811 LOC123128679 LOC123406380 LOC9267267 LOC103654191 LOC103627831 LOC8082702 AT3G61480 AT5G28350 AT5G28442 LOC100813760 LOC100802342 LOC101246379 LOC103841970 LOC100249848 LOC7497215 LOC7496988 LOC11439404 LOC107954533 LOC107955275 LOC106415437 LOC106415405 LOC102578698 LOC102614502 LOC127898615 LOC107801917 LOC107786678 CHLRE_12g506650v5
Function* guanine nucleotide exchange factor subunit Rich guanine nucleotide exchange factor subunit Rich guanine nucleotide exchange factor subunit Rich guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit Rich-like uncharacterized LOC9267267 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit Rich guanine nucleotide exchange factor subunit Rich Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 uncharacterized LOC101246379 RAB6A-GEF complex partner protein 1 uncharacterized LOC100249848 uncharacterized LOC7497215 uncharacterized LOC7496988 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1 guanine nucleotide exchange factor subunit RIC1-like guanine nucleotide exchange factor subunit RIC1 RAB6A-GEF complex partner protein 1-like uncharacterized LOC102614502 uncharacterized LOC127898615 uncharacterized LOC107801917 uncharacterized LOC107786678 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 3
bdi04144 Endocytosis 3
bdi05100 Bacterial invasion of epithelial cells 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae03050 Proteasome 2
tae04142 Lysosome 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04148 Efferocytosis 3
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 5
tae04144 Endocytosis 4
tae05100 Bacterial invasion of epithelial cells 4
tae00500 Starch and sucrose metabolism 3
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi04144 Endocytosis 3
vvi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04136 Autophagy - other 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr04142 Lysosome 3
mtr05100 Bacterial invasion of epithelial cells 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
ghi04144 Endocytosis 5
ghi05100 Bacterial invasion of epithelial cells 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
ghi04144 Endocytosis 5
ghi05100 Bacterial invasion of epithelial cells 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna04144 Endocytosis 8
bna05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 8
bna04144 Endocytosis 8
bna05100 Bacterial invasion of epithelial cells 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824603 123138763 123145811 123128679 123406380 9267267 103654191 103627831 8082702 825321 832920 10723119 100813760 100802342 101246379 103841970 100249848 7497215 7496988 11439404 107954533 107955275 106415437 106415405 102578698 102614502 127898615 107801917 107786678 66055510
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