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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100827559   protein RTF2 homolog 
 tae-r.2   123155648   replication termination factor 2 
 tae-r.2   123166049   replication termination factor 2 
 hvu-r.1   123407660   replication termination factor 2 
 osa-u.5   4340324   uncharacterized LOC4340324 
 zma-u.5   103637974   replication termination factor 2 
 sbi-r.1   8065413   protein RTF2 homolog 
 ath-u.5   AT5G58020   RTF2 RING-finger protein 
 gma-u.5   100790159   replication termination factor 2 
 gma-u.5   100779501   replication termination factor 2 
 sly-u.5   101261532   uncharacterized LOC101261532 
 bra-r.6   103845240   replication termination factor 2 
 bra-r.6   103851666   replication termination factor 2 
 vvi-u.5   100243282   uncharacterized LOC100243282 
 ppo-u.5   7493405   uncharacterized LOC7493405 
 ppo-u.5   7485230   uncharacterized LOC7485230 
 mtr-u.5   11427118   replication termination factor 2 
 ghi-r.1   107931409   replication termination factor 2 
 ghi-r.1   107893426   replication termination factor 2 
 ghi-r.1   107888434   replication termination factor 2 
 bna-r.1   106387695   replication termination factor 2-like 
 bna-r.1   106371574   replication termination factor 2-like 
 bna-r.1   106426067   replication termination factor 2-like 
 sot-r.1   107059939   protein RTF2 homolog 
 cit-r.1   107176482   uncharacterized LOC107176482 
 nta-r.1   107814563   uncharacterized LOC107814563 
 nta-r.1   107823415   uncharacterized LOC107823415 
 cre-r.1   CHLRE_03g150650v5   uncharacterized protein 

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Top 50 coexpressed genes to 100827559 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100827559 (bdi-r.1 coexpression data)

CoexMap"100827559"


bdiLOC100827559 | Entrez gene ID : 100827559      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 2 1 1 1 1 1 2 1 2 1 2 1 3 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071171 [list] [network] site-specific DNA replication termination at RTS1 barrier  (1 genes)  IEA  
GO:1902979 [list] [network] mitotic DNA replication termination  (1 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003564198.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  mito 1,  plas 1,  nucl_plas 1,  mito_plas 1  (predict for XP_003564198.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_003564198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100827559
tae-r.2
for
123155648
tae-r.2
for
123166049
hvu-r.1
for
123407660
osa-u.5
for
4340324
zma-u.5
for
103637974
sbi-r.1
for
8065413
ath-u.5
for
AT5G58020
gma-u.5
for
100790159
gma-u.5
for
100779501
sly-u.5
for
101261532
bra-r.6
for
103845240
bra-r.6
for
103851666
vvi-u.5
for
100243282
ppo-u.5
for
7493405
ppo-u.5
for
7485230
mtr-u.5
for
11427118
ghi-r.1
for
107931409
ghi-r.1
for
107893426
ghi-r.1
for
107888434
bna-r.1
for
106387695
bna-r.1
for
106371574
bna-r.1
for
106426067
sot-r.1
for
107059939
cit-r.1
for
107176482
nta-r.1
for
107814563
nta-r.1
for
107823415
cre-r.1
for
CHLRE_03g150650v5


Ortholog ID: 8205
Species bdi tae tae hvu osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100827559 LOC123155648 LOC123166049 LOC123407660 LOC4340324 LOC103637974 LOC8065413 AT5G58020 LOC100790159 LOC100779501 LOC101261532 LOC103845240 LOC103851666 LOC100243282 LOC7493405 LOC7485230 LOC11427118 LOC107931409 LOC107893426 LOC107888434 LOC106387695 LOC106426067 LOC106388455 LOC107059939 LOC107176482 LOC107814563 LOC107823415 CHLRE_03g150650v5
Function* protein RTF2 homolog replication termination factor 2 replication termination factor 2 replication termination factor 2 uncharacterized LOC4340324 replication termination factor 2 protein RTF2 homolog RTF2 RING-finger protein replication termination factor 2 replication termination factor 2 uncharacterized LOC101261532 replication termination factor 2 replication termination factor 2 uncharacterized LOC100243282 uncharacterized LOC7493405 uncharacterized LOC7485230 replication termination factor 2 replication termination factor 2 replication termination factor 2 replication termination factor 2 replication termination factor 2-like replication termination factor 2-like replication termination factor 2-like protein RTF2 homolog uncharacterized LOC107176482 uncharacterized LOC107814563 uncharacterized LOC107823415 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 6
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 3
ghi03272 Virion - Hepatitis viruses 3
ghi04144 Endocytosis 3
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 4
ghi03272 Virion - Hepatitis viruses 4
ghi04144 Endocytosis 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100827559 123155648 123166049 123407660 4340324 103637974 8065413 835914 100790159 100779501 101261532 103845240 103851666 100243282 7493405 7485230 11427118 107931409 107893426 107888434 106387695 106426067 106388455 107059939 107176482 107814563 107823415 5721149
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