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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100828383   exosome complex component RRP41 homolog 
 tae-r.2   123183048   exosome complex component RRP41 homolog 
 tae-r.2   123159797   exosome complex component RRP41 homolog 
 tae-r.2   123067730   exosome complex component RRP41 homolog 
 hvu-r.1   123449937   exosome complex component RRP41 homolog 
 osa-u.5   4346519   exosome complex component RRP41 homolog 
 zma-u.5   100192964   uncharacterized LOC100192964 
 sbi-r.1   8072548   exosome complex component RRP41 homolog 
 sbi-r.1   8063580   exosome complex component RRP41 homolog 
 ath-u.5   RRP41   3'-5'-exoribonuclease family protein 
 gma-u.5   100818324   exosome complex component RRP41 homolog 
 gma-u.5   100782953   exosome complex component RRP41 homolog 
 sly-u.5   101250449   exosome complex component RRP41 homolog 
 bra-r.6   103841986   exosome complex component RRP41 homolog 
 bra-r.6   103830312   exosome complex component RRP41 homolog 
 vvi-u.5   100265488   exosome complex component RRP41 homolog 
 ppo-u.5   7492754   exosome complex component RRP41 homolog 
 mtr-u.5   11431768   exosome complex component RRP41 homolog 
 ghi-r.1   107923046   exosome complex component RRP41 homolog 
 ghi-r.1   107909774   exosome complex component RRP41 homolog 
 bna-r.1   106365102   exosome complex component RRP41 homolog 
 bna-r.1   106413798   exosome complex component RRP41 homolog 
 bna-r.1   106353278   exosome complex component RRP41 homolog 
 sot-r.1   102597680   exosome complex component RRP41 
 cit-r.1   102622275   exosome complex component RRP41 homolog 
 nta-r.1   107819315   exosome complex component RRP41 homolog 
 nta-r.1   107773161   exosome complex component RRP41 homolog 
 cre-r.1   CHLRE_06g284500v5   uncharacterized protein 

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Top 50 coexpressed genes to 100828383 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100828383 (bdi-r.1 coexpression data)

CoexMap"100828383"


bdiLOC100828383 | Entrez gene ID : 100828383      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 2 1 2 1 2 1 1 1 2 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03018 [list] [network] RNA degradation (115 genes)
GO BP
GO:0016075 [list] [network] rRNA catabolic process  (7 genes)  IEA  
GO:0071028 [list] [network] nuclear mRNA surveillance  (7 genes)  IEA  
GO:0071051 [list] [network] poly(A)-dependent snoRNA 3'-end processing  (9 genes)  IEA  
GO:0034475 [list] [network] U4 snRNA 3'-end processing  (10 genes)  IEA  
GO CC
GO:0000177 [list] [network] cytoplasmic exosome (RNase complex)  (11 genes)  IEA  
GO:0000176 [list] [network] nuclear exosome (RNase complex)  (15 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (178 genes)  IEA  
GO MF
Protein XP_003567917.1 [sequence] [blastp]
XP_010231042.1 [sequence] [blastp]
XP_010231043.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  cyto_pero 2,  cysk_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_003567917.1)
cyto 4,  nucl 2,  cyto_pero 2,  cysk_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_010231042.1)
cyto 4,  nucl 2,  cyto_pero 2,  cysk_nucl 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_010231043.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003567917.1)
other 8  (predict for XP_010231042.1)
other 8  (predict for XP_010231043.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100828383
tae-r.2
for
123183048
tae-r.2
for
123159797
tae-r.2
for
123067730
hvu-r.1
for
123449937
osa-u.5
for
4346519
zma-u.5
for
100192964
sbi-r.1
for
8072548
sbi-r.1
for
8063580
ath-u.5
for
RRP41
gma-u.5
for
100818324
gma-u.5
for
100782953
sly-u.5
for
101250449
bra-r.6
for
103841986
bra-r.6
for
103830312
vvi-u.5
for
100265488
ppo-u.5
for
7492754
mtr-u.5
for
11431768
ghi-r.1
for
107923046
ghi-r.1
for
107909774
bna-r.1
for
106365102
bna-r.1
for
106413798
bna-r.1
for
106353278
sot-r.1
for
102597680
cit-r.1
for
102622275
nta-r.1
for
107819315
nta-r.1
for
107773161
cre-r.1
for
CHLRE_06g284500v5


Ortholog ID: 7264
Species bdi tae tae tae hvu osa zma sbi sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC100828383 LOC123183048 LOC123067730 LOC123040610 LOC123449937 LOC4346519 LOC100192964 LOC8072548 LOC8063580 RRP41 LOC100818324 LOC100782953 LOC101250449 LOC103841986 LOC103830312 LOC100265488 LOC7492754 LOC11431768 LOC107923046 LOC107909774 LOC106365102 LOC106353278 LOC106402471 LOC102597680 LOC102622275 LOC107819315 LOC107773161 CHLRE_06g284500v5
Function* exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog uncharacterized LOC100192964 exosome complex component RRP41 homolog exosome complex component RRP41 homolog 3'-5'-exoribonuclease family protein exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 exosome complex component RRP41 homolog exosome complex component RRP41 homolog exosome complex component RRP41 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03018 RNA degradation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03018 RNA degradation 5
tae00450 Selenocompound metabolism 2
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03018 RNA degradation 2
gma03010 Ribosome 2
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03018 RNA degradation 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03018 RNA degradation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 5
cre03420 Nucleotide excision repair 4
cre03008 Ribosome biogenesis in eukaryotes 3
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100828383 123183048 123067730 123040610 123449937 4346519 100192964 8072548 8063580 825335 100818324 100782953 101250449 103841986 103830312 100265488 7492754 11431768 107923046 107909774 106365102 106353278 106402471 102597680 102622275 107819315 107773161 5720981
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