ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100830394	probable histone H2A.2
bdi-r.1	100846160	probable histone H2AXa
bdi-r.1	100830704	probable histone H2A.7
tae-r.2	123146235	probable histone H2AXb
tae-r.2	123149421	probable histone H2AXb
tae-r.2	123149422	probable histone H2AXb
hvu-r.1	123401046	probable histone H2AXb
hvu-r.1	123407816	probable histone H2AXb
hvu-r.1	123425798	probable histone H2A.2
osa-u.5	9267462	probable histone H2A.3
osa-u.5	4352128	probable histone H2A.7
osa-u.5	4343519	probable histone H2A.2
zma-u.5	100194327	Histone H2A
zma-u.5	100193816	uncharacterized LOC100193816
zma-u.5	103640970	probable histone H2AXb
sbi-r.1	8064629	probable histone H2AXb
sbi-r.1	8059983	probable histone H2AXa
sbi-r.1	8055640	probable histone H2AXb
ath-u.5	GAMMA-H2AX	gamma histone
ath-u.5	HTA10	histone H2A 10
ath-u.5	H2AXA	Histone superfamily protein
gma-u.5	100810491	probable histone H2A.3
gma-u.5	100816280	probable histone H2A.3
gma-u.5	100818215	histone H2AX
sly-u.5	101264975	histone H2AX-like
sly-u.5	101247665	probable histone H2A.1
sly-u.5	101248985	histone H2AX-like
bra-r.6	103835846	probable histone H2A.2
bra-r.6	103868592	probable histone H2A.1
bra-r.6	103869292	probable histone H2A.2
vvi-u.5	100257319	histone H2AX-like
vvi-u.5	100259607	histone H2AX
vvi-u.5	100265822	probable histone H2A.2
ppo-u.5	18109775	histone H2AX
ppo-u.5	18095880	histone H2A.6
ppo-u.5	7494319	probable histone H2A.3
mtr-u.5	11430690	histone H2AX
mtr-u.5	11408670	histone H2A.6
mtr-u.5	11409476	histone H2A.6
ghi-r.1	107926310	probable histone H2A.1
ghi-r.1	107953195	histone H2AX
ghi-r.1	107952215	histone H2AX
bna-r.1	106445749	probable histone H2A.3
bna-r.1	106451851	probable histone H2A.2
bna-r.1	106453183	probable histone H2AXa
sot-r.1	102592368	probable histone H2AXb
sot-r.1	102586233	histone H2A.6-like
cit-r.1	102609655	histone H2A.6
cit-r.1	102618811	histone H2AX
cit-r.1	102619114	histone H2AX
nta-r.1	107786693	histone H2A.6
nta-r.1	107768546	histone H2AX-like
nta-r.1	107831487	histone H2A.6-like
cre-r.1	CHLRE_17g710400v5	uncharacterized protein
cre-r.1	CHLRE_12g505550v5	uncharacterized protein
cre-r.1	CHLRE_12g504500v5	uncharacterized protein

Top 50 coexpressed genes to 100830394 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100830394 (bdi-r.1 coexpression data)

CoexMap"100830394"

[Cytoscape]

Annotation

functional annotation

KEGG

bdi03082 [list] [network] ATP-dependent chromatin remodeling (59 genes)

GO BP

GO CC

GO:0000786 [list] [network] nucleosome

(64 genes)

IEA

GO MF

GO:0030527 [list] [network] structural constituent of chromatin	(55 genes)	IEA
GO:0046982 [list] [network] protein heterodimerization activity	(102 genes)	IEA
GO:0003677 [list] [network] DNA binding	(1744 genes)	IEA

Protein

XP_003562963.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 3

(predict for XP_003562963.1)

Subcellular
localization
TargetP

mito 3

(predict for XP_003562963.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100830394	bdi-r.1 for 100846160	bdi-r.1 for 100830704	tae-r.2 for 123146235	tae-r.2 for 123149421	tae-r.2 for 123149422	hvu-r.1 for 123401046	hvu-r.1 for 123407816	hvu-r.1 for 123425798	osa-u.5 for 9267462	osa-u.5 for 4352128	osa-u.5 for 4343519	zma-u.5 for 100194327	zma-u.5 for 100193816	zma-u.5 for 103640970	sbi-r.1 for 8064629	sbi-r.1 for 8059983	sbi-r.1 for 8055640	ath-u.5 for GAMMA-H2AX	ath-u.5 for HTA10	ath-u.5 for H2AXA	gma-u.5 for 100810491	gma-u.5 for 100816280	gma-u.5 for 100818215	sly-u.5 for 101264975	sly-u.5 for 101247665	sly-u.5 for 101248985	bra-r.6 for 103835846	bra-r.6 for 103868592	bra-r.6 for 103869292	vvi-u.5 for 100257319	vvi-u.5 for 100259607	vvi-u.5 for 100265822	ppo-u.5 for 18109775	ppo-u.5 for 18095880	ppo-u.5 for 7494319	mtr-u.5 for 11430690	mtr-u.5 for 11408670	mtr-u.5 for 11409476	ghi-r.1 for 107926310	ghi-r.1 for 107953195	ghi-r.1 for 107952215	bna-r.1 for 106445749	bna-r.1 for 106451851	bna-r.1 for 106453183	sot-r.1 for 102592368	sot-r.1 for 102586233	cit-r.1 for 102609655	cit-r.1 for 102618811	cit-r.1 for 102619114	nta-r.1 for 107786693	nta-r.1 for 107768546	nta-r.1 for 107831487	cre-r.1 for CHLRE_17g710400v5	cre-r.1 for CHLRE_12g505550v5	cre-r.1 for CHLRE_12g504500v5

Ortholog

Ortholog ID: 242

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

HTA10

H2AXA

HTA13

Function^*

probable histone H2A.2

probable histone H2AXa

probable histone H2A.7

probable histone H2AXb

histone H2A.4-like

probable histone H2AXb

probable histone H2A.2

histone H2A.4

probable histone H2A.3

probable histone H2A.7

probable histone H2AXa

Histone H2A

uncharacterized LOC100193816

uncharacterized LOC100273666

probable histone H2AXa

probable histone H2A.2

probable histone H2A.1

histone H2A 10

Histone superfamily protein

histone H2A 13

histone H2AX

probable histone H2A.3

histone H2AX

histone H2AX-like

probable histone H2AXb

histone H2A.6

probable histone H2A.1

histone H2AX-like

histone H2AX

histone H2A.6

histone H2AX

histone H2A.6

probable histone H2AXb

probable histone H2A.1

histone H2A.6

probable histone H2A.2

probable histone H2AXb

histone H2A.6-like

probable histone H2A.1

histone H2AX

histone H2AX-like

histone H2A.6-like

histone H2A.6

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	6
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	4
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03018	RNA degradation	5
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	5
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2
bra00010	Glycolysis / Gluconeogenesis	2
bra00620	Pyruvate metabolism	2
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	11
vvi01232	Nucleotide metabolism	3
vvi00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00240	Pyrimidine metabolism	3
vvi01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	4
ppo03013	Nucleocytoplasmic transport	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	4
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	6
sot00240	Pyrimidine metabolism	3
sot01232	Nucleotide metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	2
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03060	Protein export	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03082	ATP-dependent chromatin remodeling	13

Expression

Expression pattern

Entrez Gene ID^*

100830394

100846160

100830704

123161694

123044613

123115855

123401046

123425798

123425799

9267462

4352128

4333939

100194327

100193816

100273666

8059983

8081716

8081715

841528

837409

821614

100818215

100793396

106798115

101264975

101256806

101262690

103844917

103832842

100257319

100259607

100254490

18109775

18095880

112323895

11430690

11408670

11443483

107899136

107920392

107903497

106345992

125603080

102592368

102586233

102582157

102618811

102619114

102620423

107800855

107780380

107822337

5725954

66053636

5716480

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	2	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100830394 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100830394 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**