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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100830539   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 tae-r.2   123144840   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 tae-r.2   123127761   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 tae-r.2   123137482   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 hvu-r.1   123405999   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 osa-u.5   4329995   polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 
 zma-u.5   100279772   uncharacterized LOC100279772 
 sbi-r.1   8059688   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 ath-u.5   AT5G14580   polyribonucleotide nucleotidyltransferase 
 gma-u.5   102669209   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 gma-u.5   100816982   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 sly-u.5   101256146   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 bra-r.6   103856086   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 bra-r.6   103846477   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 vvi-u.5   100257571   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 ppo-u.5   7487862   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 mtr-u.5   11434901   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 ghi-r.1   107888666   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 ghi-r.1   107892267   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 bna-r.1   106416529   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 bna-r.1   106431657   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 bna-r.1   106372102   polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 
 sot-r.1   102598659   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 cit-r.1   102628795   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 nta-r.1   107816939   polyribonucleotide nucleotidyltransferase 2, mitochondrial 
 nta-r.1   107801697   polyribonucleotide nucleotidyltransferase 2, mitochondrial-like 

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Top 50 coexpressed genes to 100830539 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100830539 (bdi-r.1 coexpression data)

CoexMap"100830539"


bdiLOC100830539 | Entrez gene ID : 100830539      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 2 1 1 1 2 3 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03018 [list] [network] RNA degradation (115 genes)
GO BP
GO:0000958 [list] [network] mitochondrial mRNA catabolic process  (2 genes)  IEA  
GO:0000965 [list] [network] mitochondrial RNA 3'-end processing  (7 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (95 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (524 genes)  IEA  
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO MF
GO:0004654 [list] [network] polyribonucleotide nucleotidyltransferase activity  (2 genes)  IEA  
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (34 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
Protein XP_010235710.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  mito 4,  cyto_mito 2  (predict for XP_010235710.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_010235710.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100830539
tae-r.2
for
123144840
tae-r.2
for
123127761
tae-r.2
for
123137482
hvu-r.1
for
123405999
osa-u.5
for
4329995
zma-u.5
for
100279772
sbi-r.1
for
8059688
ath-u.5
for
AT5G14580
gma-u.5
for
102669209
gma-u.5
for
100816982
sly-u.5
for
101256146
bra-r.6
for
103856086
bra-r.6
for
103846477
vvi-u.5
for
100257571
ppo-u.5
for
7487862
mtr-u.5
for
11434901
ghi-r.1
for
107888666
ghi-r.1
for
107892267
bna-r.1
for
106416529
bna-r.1
for
106431657
bna-r.1
for
106372102
sot-r.1
for
102598659
cit-r.1
for
102628795
nta-r.1
for
107816939
nta-r.1
for
107801697


Ortholog ID: 8597
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100830539 LOC123144840 LOC123127761 LOC123137482 LOC123405999 LOC4329995 LOC100279772 LOC8059688 AT5G14580 LOC102669209 LOC100816982 LOC101256146 LOC103856086 LOC103846477 LOC100257571 LOC7487862 LOC11434901 LOC107888666 LOC107892267 LOC106416529 LOC106431657 LOC106372102 LOC102598659 LOC102628795 LOC107816939 LOC107801697
Function* polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like uncharacterized LOC100279772 polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03020 RNA polymerase 3
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 3
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100830539 123144840 123127761 123137482 123405999 4329995 100279772 8059688 831309 102669209 100816982 101256146 103856086 103846477 100257571 7487862 11434901 107888666 107892267 106416529 106431657 106372102 102598659 102628795 107816939 107801697
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