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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100830919   pentatricopeptide repeat-containing protein At2g37320 
 tae-r.2   123149157   pentatricopeptide repeat-containing protein At2g37320 
 hvu-r.1   123411941   pentatricopeptide repeat-containing protein At2g37320-like 
 osa-u.5   4350271   pentatricopeptide repeat-containing protein At2g37320 
 osa-u.5   4345023   pentatricopeptide repeat-containing protein At2g37320 
 zma-u.5   100193547   uncharacterized LOC100193547 
 zma-u.5   100274275   uncharacterized LOC100274275 
 sbi-r.1   8060232   pentatricopeptide repeat-containing protein At2g37320 
 ath-u.5   AT2G37320   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100813915   pentatricopeptide repeat-containing protein At2g37320 
 sly-u.5   104649094   pentatricopeptide repeat-containing protein At2g37320 
 bra-r.6   103865589   pentatricopeptide repeat-containing protein At2g37320 
 bra-r.6   103867206   pentatricopeptide repeat-containing protein At2g37320 
 mtr-u.5   11435688   uncharacterized LOC11435688 
 ghi-r.1   107893892   pentatricopeptide repeat-containing protein At2g37320 
 ghi-r.1   107918851   pentatricopeptide repeat-containing protein At2g37320 
 sot-r.1   102598140   pentatricopeptide repeat-containing protein At2g37320 
 cit-r.1   102607158   pentatricopeptide repeat-containing protein At2g37320 
 nta-r.1   107764654   pentatricopeptide repeat-containing protein At2g37320-like 

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Top 50 coexpressed genes to 100830919 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100830919 (bdi-r.1 coexpression data)

CoexMap"100830919"


bdiLOC100830919 | Entrez gene ID : 100830919      
Species bdi tae hvu osa zma sbi ath gma sly bra mtr ghi sot cit nta vvi ppo cre bna
Paralog 1 1 1 2 2 1 1 1 1 2 1 2 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010230770.1 [sequence] [blastp]
XP_024316101.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_010230770.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for XP_024316101.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_010230770.1)
mito 6  (predict for XP_024316101.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100830919
tae-r.2
for
123149157
hvu-r.1
for
123411941
osa-u.5
for
4350271
osa-u.5
for
4345023
zma-u.5
for
100193547
zma-u.5
for
100274275
sbi-r.1
for
8060232
ath-u.5
for
AT2G37320
gma-u.5
for
100813915
sly-u.5
for
104649094
bra-r.6
for
103865589
bra-r.6
for
103867206
mtr-u.5
for
11435688
ghi-r.1
for
107893892
ghi-r.1
for
107918851
sot-r.1
for
102598140
cit-r.1
for
102607158
nta-r.1
for
107764654


Ortholog ID: 6515
Species bdi tae hvu osa osa zma zma sbi ath gma sly bra bra mtr ghi ghi sot cit nta
Symbol LOC100830919 LOC123149157 LOC123411941 LOC4350271 LOC4345023 LOC100193547 LOC100274275 LOC8060232 AT2G37320 LOC100813915 LOC104649094 LOC103865589 LOC103867206 LOC11435688 LOC107893892 LOC107918851 LOC102598140 LOC102607158 LOC107764654
Function* pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320-like pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 uncharacterized LOC100193547 uncharacterized LOC100274275 pentatricopeptide repeat-containing protein At2g37320 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 uncharacterized LOC11435688 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320 pentatricopeptide repeat-containing protein At2g37320-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma00513 Various types of N-glycan biosynthesis 4
zma00510 N-Glycan biosynthesis 3
zma00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04626 Plant-pathogen interaction 4
mtr04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100830919 123149157 123411941 4350271 4345023 100193547 100274275 8060232 818309 100813915 104649094 103865589 103867206 11435688 107893892 107918851 102598140 102607158 107764654
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