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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100831221   protein HEADING DATE 3A 
 bdi-r.1   100838275   protein HEADING DATE 3A 
 tae-r.2   123069202   protein RICE FLOWERING LOCUS T 1 
 hvu-r.1   123443129   protein HEADING DATE 3A-like 
 hvu-r.1   123403951   protein FLOWERING LOCUS T-like 
 hvu-r.1   123409685   protein HEADING DATE 3A 
 osa-u.5   107276195   protein VERNALIZATION 3 
 osa-u.5   4340185   protein HEADING DATE 3A-like 
 zma-u.5   100127524   uncharacterized LOC100127524 
 sbi-r.1   8079504   protein RICE FLOWERING LOCUS T 1 
 sbi-r.1   8073696   protein FLOWERING LOCUS T 
 ath-u.5   FT   PEBP (phosphatidylethanolamine-binding protein) family protein 
 gma-u.5   FT2C   protein FLOWERING LOCUS T-like 
 sly-u.5   SP5G   protein SELF PRUNING 5G 
 bra-r.6   103831057   protein TWIN SISTER of FT 
 bra-r.6   103852241   protein FLOWERING LOCUS T 
 ppo-u.5   7472463   protein HEADING DATE 3A 
 ghi-r.1   107909115   protein HEADING DATE 3A 
 ghi-r.1   107928282   protein HEADING DATE 3A 
 bna-r.1   111207300   protein FLOWERING LOCUS T 
 bna-r.1   106426212   protein TWIN SISTER of FT 
 bna-r.1   106402982   protein FLOWERING LOCUS T 
 sot-r.1   102605989   protein FLOWERING LOCUS T-like 
 cit-r.1   102607363   protein HEADING DATE 3A-like 
 cit-r.1   102616595   protein HEADING DATE 3A-like 
 cit-r.1   102607069   protein HEADING DATE 3A-like 

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Top 50 coexpressed genes to 100831221 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100831221 (bdi-r.1 coexpression data)

CoexMap"100831221"


bdiLOC100831221 | Entrez gene ID : 100831221      
Species bdi tae hvu osa zma sbi ath gma sly bra ppo ghi bna sot cit cre nta mtr vvi
Paralog 2 1 3 2 1 2 1 1 1 2 1 2 3 1 3 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04712 [list] [network] Circadian rhythm - plant (44 genes)
GO BP
GO:0010229 [list] [network] inflorescence development  (2 genes)  IEA  
GO:0048510 [list] [network] regulation of timing of transition from vegetative to reproductive phase  (2 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (7 genes)  IEA  
GO:0009909 [list] [network] regulation of flower development  (26 genes)  IEA  
GO CC
GO MF
Protein NP_001412206.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  mito 1  (predict for NP_001412206.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001412206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100831221
bdi-r.1
for
100838275
tae-r.2
for
123069202
hvu-r.1
for
123443129
hvu-r.1
for
123403951
hvu-r.1
for
123409685
osa-u.5
for
107276195
osa-u.5
for
4340185
zma-u.5
for
100127524
sbi-r.1
for
8079504
sbi-r.1
for
8073696
ath-u.5
for
FT
gma-u.5
for
FT2C
sly-u.5
for
SP5G
bra-r.6
for
103831057
bra-r.6
for
103852241
ppo-u.5
for
7472463
ghi-r.1
for
107909115
ghi-r.1
for
107928282
bna-r.1
for
111207300
bna-r.1
for
106426212
bna-r.1
for
106402982
sot-r.1
for
102605989
cit-r.1
for
102607363
cit-r.1
for
102616595
cit-r.1
for
102607069


Ortholog ID: 1154
Species bdi tae tae hvu hvu osa zma zma sbi sbi sbi ath gma gma bra bra ppo ghi ghi bna bna bna sot sot cit cit cit
Symbol LOC100838275 LOC123069202 LOC123162402 LOC123403951 LOC123409685 LOC107276195 LOC100127524 ZCN14 LOC8079504 LOC8073696 LOC8069174 FT FT2A FT5A LOC103831057 LOC103852241 LOC7472463 LOC107909115 LOC107928282 LOC111207300 LOC106426212 LOC111213971 LOC102605989 FT LOC102607363 LOC102616595 LOC102607069
Function* protein HEADING DATE 3A protein RICE FLOWERING LOCUS T 1 protein HEADING DATE 3A protein FLOWERING LOCUS T-like protein HEADING DATE 3A protein VERNALIZATION 3 uncharacterized LOC100127524 ZCN14 protein protein RICE FLOWERING LOCUS T 1 protein FLOWERING LOCUS T protein HEADING DATE 3A PEBP (phosphatidylethanolamine-binding protein) family protein protein FLOWERING LOCUS T protein FLOWERING LOCUS T protein TWIN SISTER of FT protein FLOWERING LOCUS T protein HEADING DATE 3A protein HEADING DATE 3A protein HEADING DATE 3A protein FLOWERING LOCUS T protein TWIN SISTER of FT protein FLOWERING LOCUS T protein FLOWERING LOCUS T-like flowering locus T protein protein HEADING DATE 3A-like protein HEADING DATE 3A-like protein HEADING DATE 3A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 4
tae00511 Other glycan degradation 2
tae00600 Sphingolipid metabolism 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00430 Taurine and hypotaurine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma00999 Biosynthesis of various plant secondary metabolites 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi04712 Circadian rhythm - plant 2
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 3
ghi00040 Pentose and glucuronate interconversions 2
ghi04712 Circadian rhythm - plant 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838275 123069202 123162402 123403951 123409685 107276195 100127524 100127523 8079504 8073696 8069174 842859 100814951 100796994 103831057 103852241 7472463 107909115 107928282 111207300 106426212 111213971 102605989 102577452 102607363 102616595 102607069
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