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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100832204   SWI/SNF complex component SNF12 homolog 
 tae-r.2   123045289   SWI/SNF complex component SNF12 homolog 
 tae-r.2   123053127   SWI/SNF complex component SNF12 homolog 
 tae-r.2   123189035   SWI/SNF complex component SNF12 homolog 
 hvu-r.1   123426518   SWI/SNF complex component SNF12 homolog 
 osa-u.5   4335638   SWI/SNF complex component SNF12 homolog 
 zma-u.5   103638113   SWI/SNF complex component SNF12 homolog 
 zma-u.5   109940767   SWI/SNF complex component SNF12 homolog 
 zma-u.5   100382816   uncharacterized LOC100382816 
 sbi-r.1   8072202   SWI/SNF complex component SNF12 homolog 
 ath-u.5   AT3G01890   SWIB/MDM2 domain superfamily protein 
 ath-u.5   CHC1   SWIB/MDM2 domain superfamily protein 
 gma-u.5   100817271   SWI/SNF complex component SNF12 homolog 
 gma-u.5   100802455   SWI/SNF complex component SNF12 homolog 
 gma-u.5   100790947   SWI/SNF complex component SNF12 homolog 
 sly-u.5   101264507   SWI/SNF complex component SNF12 homolog 
 sly-u.5   101248354   SWI/SNF complex component SNF12 homolog 
 bra-r.6   103856064   SWI/SNF complex component SNF12 homolog 
 bra-r.6   103846505   SWI/SNF complex component SNF12 homolog 
 vvi-u.5   100261825   SWI/SNF complex component SNF12 homolog 
 vvi-u.5   100250968   SWI/SNF complex component SNF12 homolog 
 ppo-u.5   18107230   SWI/SNF complex component SNF12 homolog 
 ppo-u.5   7454707   SWI/SNF complex component SNF12 homolog 
 ppo-u.5   7454548   SWI/SNF complex component SNF12 homolog 
 mtr-u.5   25495726   SWI/SNF complex component SNF12 homolog 
 mtr-u.5   11405569   SWI/SNF complex component SNF12 homolog 
 ghi-r.1   121208437   SWI/SNF complex component SNF12 homolog 
 ghi-r.1   121211070   SWI/SNF complex component SNF12 homolog 
 ghi-r.1   107926481   SWI/SNF complex component SNF12 homolog 
 bna-r.1   111214314   SWI/SNF complex component SNF12 homolog 
 bna-r.1   106430859   SWI/SNF complex component SNF12 homolog 
 bna-r.1   111198021   SWI/SNF complex component SNF12 homolog 
 sot-r.1   102602635   SWI/SNF complex component SNF12 homolog 
 sot-r.1   102587176   SWI/SNF complex component SNF12 homolog 
 cit-r.1   102609965   SWI/SNF complex component SNF12 homolog 
 cit-r.1   102630009   SWI/SNF complex component SNF12 homolog 
 nta-r.1   107799431   SWI/SNF complex component SNF12 homolog 
 nta-r.1   107797351   SWI/SNF complex component SNF12 homolog 
 nta-r.1   107767989   SWI/SNF complex component SNF12 homolog 
 cre-r.1   CHLRE_10g448700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100832204 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100832204 (bdi-r.1 coexpression data)

CoexMap"100832204"


bdiLOC100832204 | Entrez gene ID : 100832204      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 3 1 2 3 2 2 2 3 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03082 [list] [network] ATP-dependent chromatin remodeling (59 genes)
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0016514 [list] [network] SWI/SNF complex  (5 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003579601.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_003579601.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_003579601.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100832204
tae-r.2
for
123045289
tae-r.2
for
123053127
tae-r.2
for
123189035
hvu-r.1
for
123426518
osa-u.5
for
4335638
zma-u.5
for
103638113
zma-u.5
for
109940767
zma-u.5
for
100382816
sbi-r.1
for
8072202
ath-u.5
for
AT3G01890
ath-u.5
for
CHC1
gma-u.5
for
100817271
gma-u.5
for
100802455
gma-u.5
for
100790947
sly-u.5
for
101264507
sly-u.5
for
101248354
bra-r.6
for
103856064
bra-r.6
for
103846505
vvi-u.5
for
100261825
vvi-u.5
for
100250968
ppo-u.5
for
18107230
ppo-u.5
for
7454707
ppo-u.5
for
7454548
mtr-u.5
for
25495726
mtr-u.5
for
11405569
ghi-r.1
for
121208437
ghi-r.1
for
121211070
ghi-r.1
for
107926481
bna-r.1
for
111214314
bna-r.1
for
106430859
bna-r.1
for
111198021
sot-r.1
for
102602635
sot-r.1
for
102587176
cit-r.1
for
102609965
cit-r.1
for
102630009
nta-r.1
for
107799431
nta-r.1
for
107797351
nta-r.1
for
107767989
cre-r.1
for
CHLRE_10g448700v5


Ortholog ID: 3096
Species bdi tae tae tae hvu osa zma zma zma sbi ath ath gma gma gma sly sly bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC100832204 LOC123045289 LOC123053127 LOC123189035 LOC123426518 LOC4335638 LOC103638113 LOC109940767 LOC100382816 LOC8072202 AT3G01890 CHC1 LOC100817271 LOC100784907 LOC100776562 LOC101264507 LOC101248354 LOC103856064 LOC103846505 LOC100261825 LOC100250968 LOC18107230 LOC7454548 LOC7495776 LOC25495726 LOC11405569 LOC121208437 LOC107888808 LOC107904814 LOC106430859 LOC111198021 LOC106372233 LOC102602635 LOC102587176 LOC102609965 LOC102630009 LOC107799431 LOC107797351 LOC107816546 CHLRE_10g448700v5
Function* SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog uncharacterized LOC100382816 SWI/SNF complex component SNF12 homolog SWIB/MDM2 domain superfamily protein SWIB/MDM2 domain superfamily protein SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog SWI/SNF complex component SNF12 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae04712 Circadian rhythm - plant 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03082 ATP-dependent chromatin remodeling 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma00600 Sphingolipid metabolism 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 6
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00230 Purine metabolism 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 3
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100832204 123045289 123053127 123189035 123426518 4335638 103638113 109940767 100382816 8072202 820093 831267 100817271 100784907 100776562 101264507 101248354 103856064 103846505 100261825 100250968 18107230 7454548 7495776 25495726 11405569 121208437 107888808 107904814 106430859 111198021 106372233 102602635 102587176 102609965 102630009 107799431 107797351 107816546 5723870
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