ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100833502	uncharacterized LOC100833502
osa-u.5	4346046	uncharacterized LOC4346046
zma-u.5	103642476	TBC1 domain family member 5 homolog B
ath-u.5	AT4G29950	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT5G57210	Ypt/Rab-GAP domain of gyp1p superfamily protein
gma-u.5	100782008	uncharacterized LOC100782008
gma-u.5	100816501	uncharacterized LOC100816501
gma-u.5	100818700	uncharacterized LOC100818700
sly-u.5	101261558	uncharacterized LOC101261558
sly-u.5	101260951	TBC domain-containing protein C1952.17c
vvi-u.5	100250355	uncharacterized LOC100250355
ppo-u.5	7490502	uncharacterized LOC7490502
ppo-u.5	7474733	uncharacterized LOC7474733
mtr-u.5	11441149	uncharacterized LOC11441149
mtr-u.5	11431041	TBC1 domain family member 5 homolog A

Annotation

functional annotation

KEGG

GO BP

GO:0090630 [list] [network] activation of GTPase activity

(14 genes)

IEA

GO CC

GO MF

GO:0005096 [list] [network] GTPase activator activity

(52 genes)

IEA

Protein

XP_003574788.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cysk 1, chlo 1, cyto 1, mito 1, plas 1, chlo_mito 1, mito_plas 1, cyto_plas 1

(predict for XP_003574788.1)

Subcellular
localization
TargetP

mito 4

(predict for XP_003574788.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100833502	osa-u.5 for 4346046	zma-u.5 for 103642476	ath-u.5 for AT4G29950	ath-u.5 for AT5G57210	gma-u.5 for 100782008	gma-u.5 for 100816501	gma-u.5 for 100818700	sly-u.5 for 101261558	sly-u.5 for 101260951	vvi-u.5 for 100250355	ppo-u.5 for 7490502	ppo-u.5 for 7474733	mtr-u.5 for 11441149	mtr-u.5 for 11431041

Ortholog

Ortholog ID: 5465

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100833502

uncharacterized LOC543042

uncharacterized LOC123151492

uncharacterized LOC123406943

uncharacterized LOC4346046

TBC1 domain family member 5 homolog B

TBC1 domain family member 5 homolog B-like

Ypt/Rab-GAP domain of gyp1p superfamily protein

uncharacterized LOC100818700

uncharacterized LOC100816501

TBC domain-containing protein C1952.17c

uncharacterized LOC101261558

TBC1 domain family member 5 homolog B

uncharacterized LOC100250355

uncharacterized LOC7474733

uncharacterized LOC7490502

TBC1 domain family member 5 homolog A

uncharacterized LOC11441149

uncharacterized LOC107914001

TBC1 domain family member 5 homolog B

TBC1 domain family member 5 homolog A-like

TBC1 domain family member 5 homolog B-like

uncharacterized LOC102604464

uncharacterized LOC102587117

uncharacterized LOC102627438

uncharacterized LOC107775296

uncharacterized LOC107830608

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04075	Plant hormone signal transduction	3
tae00500	Starch and sucrose metabolism	2
tae00051	Fructose and mannose metabolism	2
tae00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00053	Ascorbate and aldarate metabolism	2
ath00562	Inositol phosphate metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00030	Pentose phosphate pathway	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	2
nta00650	Butanoate metabolism	2
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	2
nta00650	Butanoate metabolism	2
nta04146	Peroxisome	2

Expression

Expression pattern

Entrez Gene ID^*

100833502

543042

123151492

123406943

4346046

103642476

110436957

829118

100818700

100816501

101260951

101261558

103845158

100250355

7474733

7490502

11431041

11441149

107914001

107940286

106453366

106418550

102604464

102587117

102627438

107775296

107830608

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100833502 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100833502 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	1	2	3	2	1	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100833502 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100833502 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**