ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100833516	uncharacterized LOC100833516
osa-u.5	4344995	uncharacterized LOC4344995
zma-u.5	100275707	uncharacterized LOC100275707
ath-u.5	AT2G15560	Putative endonuclease or glycosyl hydrolase
gma-u.5	100818186	uncharacterized LOC100818186
gma-u.5	100807418	uncharacterized LOC100807418
sly-u.5	101262057	uncharacterized LOC101262057
vvi-u.5	104878785	uncharacterized LOC104878785
ppo-u.5	18097781	uncharacterized LOC18097781
ppo-u.5	7490039	uncharacterized LOC7490039
mtr-u.5	11446942	uncharacterized LOC11446942

functional annotation

KEGG

GO BP

GO:0010468 [list] [network] regulation of gene expression

(1881 genes)

IEA

GO CC

GO:0005777 [list] [network] peroxisome

(74 genes)

IEA

GO MF

GO:0004540 [list] [network] RNA nuclease activity

(124 genes)

IEA

Protein

XP_003576687.1 [sequence] [blastp]
XP_010237297.1 [sequence] [blastp]
XP_014758811.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, chlo 1	(predict for XP_003576687.1)
nucl 4, chlo 3, cysk_nucl 3	(predict for XP_010237297.1)
chlo 8, nucl 1, E.R. 1, pero 1	(predict for XP_014758811.1)

Subcellular
localization
TargetP

chlo 2	(predict for XP_003576687.1)
other 4	(predict for XP_010237297.1)
other 3, chlo 3	(predict for XP_014758811.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100833516	osa-u.5 for 4344995	zma-u.5 for 100275707	ath-u.5 for AT2G15560	gma-u.5 for 100818186	gma-u.5 for 100807418	sly-u.5 for 101262057	vvi-u.5 for 104878785	ppo-u.5 for 18097781	ppo-u.5 for 7490039	mtr-u.5 for 11446942

Ortholog ID: 8385

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC100833516

uncharacterized LOC123119960

uncharacterized LOC123102817

uncharacterized LOC123452890

uncharacterized LOC4344995

uncharacterized LOC100275707

uncharacterized LOC8058147

Putative endonuclease or glycosyl hydrolase

uncharacterized LOC100818186

uncharacterized LOC100807418

uncharacterized LOC101262057

uncharacterized LOC103844357

uncharacterized LOC104878785

uncharacterized LOC18097781

uncharacterized LOC7490039

uncharacterized LOC11446942

uncharacterized LOC107894273

uncharacterized LOC107945131

uncharacterized BNAC07G05030D

uncharacterized LOC125589588

uncharacterized LOC102588996

uncharacterized LOC102596798

uncharacterized LOC102620488

uncharacterized LOC107782181

uncharacterized LOC107776089

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2
gma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	3
sot00470	D-Amino acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	5
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3
nta00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03082	ATP-dependent chromatin remodeling	3
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100833516

123119960

123102817

123452890

4344995

100275707

8058147

816049

100818186

100807418

101262057

103844357

104878785

18097781

7490039

11446942

107894273

107945131

106445640

125589588

102588996

102596798

102620488

107782181

107776089

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100833516 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100833516 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	1	1	2	1	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100833516 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100833516 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**