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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123120765   uncharacterized LOC123120765 
 tae-r.2   123111516   uncharacterized LOC123111516 
 tae-r.2   123106903   uncharacterized LOC123106903 
 hvu-r.1   123397515   uncharacterized LOC123397515 
 osa-u.5   4346458   upstream activation factor subunit spp27 
 zma-u.5   100280587   uncharacterized LOC100280587 
 ath-u.5   AT4G26810   SWIB/MDM2 domain superfamily protein 
 gma-u.5   100527179   uncharacterized LOC100527179 
 gma-u.5   100775234   upstream activation factor subunit UAF30 
 sly-u.5   101265750   upstream activation factor subunit spp27 
 bra-r.6   103866643   upstream activation factor subunit UAF30 
 bra-r.6   103834832   upstream activation factor subunit UAF30 
 vvi-u.5   100247022   SWIB/MDM2 domain-containing-like 
 mtr-u.5   25489035   upstream activation factor subunit UAF30 
 ghi-r.1   107920801   upstream activation factor subunit UAF30 
 ghi-r.1   107895172   upstream activation factor subunit UAF30 
 sot-r.1   102601023   upstream activation factor subunit spp27 
 cit-r.1   102611765   upstream activation factor subunit UAF30 
 nta-r.1   107761532   upstream activation factor subunit spp27 

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Top 50 coexpressed genes to 123120765 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123120765 (tae-r.2 coexpression data)

CoexMap"100833627"


bdiLOC100833627 | Entrez gene ID : 100833627      
Species tae hvu osa zma ath gma sly bra vvi mtr ghi sot cit nta cre ppo sbi bna bdi
Paralog 3 1 1 1 1 2 1 2 1 1 2 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
Protein XP_003578023.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_003578023.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003578023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123120765
tae-r.2
for
123111516
tae-r.2
for
123106903
hvu-r.1
for
123397515
osa-u.5
for
4346458
zma-u.5
for
100280587
ath-u.5
for
AT4G26810
gma-u.5
for
100527179
gma-u.5
for
100775234
sly-u.5
for
101265750
bra-r.6
for
103866643
bra-r.6
for
103834832
vvi-u.5
for
100247022
mtr-u.5
for
25489035
ghi-r.1
for
107920801
ghi-r.1
for
107895172
sot-r.1
for
102601023
cit-r.1
for
102611765
nta-r.1
for
107761532


Ortholog ID: 10882
Species tae tae tae hvu osa zma ath gma gma sly bra bra vvi mtr ghi ghi sot cit nta
Symbol LOC123120765 LOC123111516 LOC123106903 LOC123397515 LOC4346458 LOC100280587 AT4G26810 LOC100527179 LOC100775234 LOC101265750 LOC103866643 LOC103834832 LOC100247022 LOC25489035 LOC107920801 LOC107895172 LOC102601023 LOC102611765 LOC107761532
Function* uncharacterized LOC123120765 uncharacterized LOC123111516 uncharacterized LOC123106903 uncharacterized LOC123397515 upstream activation factor subunit spp27 uncharacterized LOC100280587 SWIB/MDM2 domain superfamily protein uncharacterized LOC100527179 upstream activation factor subunit UAF30 upstream activation factor subunit spp27 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 SWIB/MDM2 domain-containing-like upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit UAF30 upstream activation factor subunit spp27 upstream activation factor subunit UAF30 upstream activation factor subunit spp27
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 7
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra00250 Alanine, aspartate and glutamate metabolism 3
bra01232 Nucleotide metabolism 2
bra00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03040 Spliceosome 2
ghi00190 Oxidative phosphorylation 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123120765 123111516 123106903 123397515 4346458 100280587 828788 100527179 100775234 101265750 103866643 103834832 100247022 25489035 107920801 107895172 102601023 102611765 107761532
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