Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835083   alpha-amylase type A isozyme 
 osa-u.5   9271949   alpha-amylase isozyme 3B 
 zma-u.5   100383492   putative alpha-amylase family protein 
 zma-u.5   100283908   alpha-amylase 
 zma-u.5   100273029   Alpha-amylase 1 
 ath-u.5   AMY1   alpha-amylase-like protein 
 gma-u.5   100815664   alpha-amylase-like 
 sly-u.5   101254788   alpha-amylase 
 sly-u.5   101254670   alpha-amylase 
 vvi-u.5   100250317   alpha-amylase 
 vvi-u.5   100245165   alpha-amylase 
 ppo-u.5   18109585   alpha-amylase 
 mtr-u.5   11419190   alpha-amylase 

close


Top 50 coexpressed genes to 100835083 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100835083 (bdi-r.1 coexpression data)

CoexMap"100835083"


bdiLOC100835083 | Entrez gene ID : 100835083      
Species bdi osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit sot tae bna ghi
Paralog 1 1 3 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00500 [list] [network] Starch and sucrose metabolism (150 genes)
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (658 genes)  IEA  
GO CC
GO MF
GO:0004556 [list] [network] alpha-amylase activity  (5 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (267 genes)  IEA  
Protein XP_003563559.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 5,  cyto 2,  chlo 1,  cyto_E.R. 1  (predict for XP_003563559.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003563559.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835083

.
osa-u.5
for
9271949

.
zma-u.5
for
100383492

.
zma-u.5
for
100283908

.
zma-u.5
for
100273029

.
ath-u.5
for
AMY1

.
gma-u.5
for
100815664

.
sly-u.5
for
101254788

.
sly-u.5
for
101254670

.
vvi-u.5
for
100250317

.
vvi-u.5
for
100245165

.
ppo-u.5
for
18109585

.
mtr-u.5
for
11419190

.


Ortholog ID: 1322
Species ath gma sly sly osa osa zma zma bra vvi vvi ppo mtr tae tae ghi ghi bna bna cre cre sot sot cit bdi bdi nta nta
Symbol AMY1 LOC100815664 LOC101254670 LOC101254788 LOC4342055 LOC4330830 LOC100283908 LOC100383492 LOC103871863 LOC100245165 LOC100250317 LOC18109585 LOC11419190 LOC123164937 LOC123112201 LOC107905564 LOC107916876 LOC111202328 LOC106369186 CHLRE_08g385500v5 CHLRE_08g384750v5 LOC102582328 LOC102598863 LOC102612446 LOC100835083 LOC100830032 LOC107783940 LOC107826644
Function* alpha-amylase-like protein alpha-amylase-like alpha-amylase alpha-amylase alpha-amylase isozyme 2A-like alpha-amylase-like alpha-amylase putative alpha-amylase family protein alpha-amylase 1 alpha-amylase alpha-amylase alpha-amylase alpha-amylase alpha-amylase type A isozyme alpha-amylase isozyme 3A alpha-amylase alpha-amylase alpha-amylase 1-like alpha-amylase 1 uncharacterized protein uncharacterized protein alpha-amylase-like alpha-amylase alpha-amylase alpha-amylase type A isozyme alpha-amylase type B isozyme alpha-amylase alpha-amylase-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00260 Glycine, serine and threonine metabolism 2
gma00350 Tyrosine metabolism 2
gma00360 Phenylalanine metabolism 2
gma00410 beta-Alanine metabolism 2
gma00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00940 Phenylpropanoid biosynthesis 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00430 Taurine and hypotaurine metabolism 3
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 7
tae00052 Galactose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00640 Propanoate metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi01200 Carbon metabolism 4
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
ghi00020 Citrate cycle (TCA cycle) 2
ghi00270 Cysteine and methionine metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00500 Starch and sucrose metabolism 2
bna00511 Other glycan degradation 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
bna00511 Other glycan degradation 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00592 alpha-Linolenic acid metabolism 6
cre00071 Fatty acid degradation 5
cre01212 Fatty acid metabolism 5
cre01040 Biosynthesis of unsaturated fatty acids 4
cre01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
cre01200 Carbon metabolism 3
cre01230 Biosynthesis of amino acids 2
cre00030 Pentose phosphate pathway 2
cre00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828603 100815664 101254670 101254788 4342055 4330830 100283908 100383492 103871863 100245165 100250317 18109585 11419190 123164937 123112201 107905564 107916876 111202328 106369186 5719788 5719803 102582328 102598863 102612446 100835083 100830032 107783940 107826644
The preparation time of this page was 0.1 [sec].