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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835947   probable polygalacturonase 
 osa-u.5   4347165   probable polygalacturonase 
 osa-u.5   4330924   probable polygalacturonase 
 zma-u.5   100272705   uncharacterized LOC100272705 
 zma-u.5   103632812   probable polygalacturonase 
 ath-u.5   AT3G42950   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G19170   Pectin lyase-like superfamily protein 
 gma-u.5   100800910   probable polygalacturonase 
 gma-u.5   100818529   probable polygalacturonase 
 gma-u.5   100801914   probable polygalacturonase 
 sly-u.5   101253071   probable polygalacturonase 
 sly-u.5   101252957   probable polygalacturonase 
 sly-u.5   101248218   probable polygalacturonase 
 vvi-u.5   100249126   probable polygalacturonase 
 ppo-u.5   7490535   probable polygalacturonase 
 ppo-u.5   18100310   probable polygalacturonase 
 mtr-u.5   11441243   probable polygalacturonase 
 mtr-u.5   11418613   probable polygalacturonase 

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Top 50 coexpressed genes to 100835947 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100835947 (bdi-r.1 coexpression data)

CoexMap"100835947"


bdiLOC100835947 | Entrez gene ID : 100835947      
Species bdi osa zma ath gma sly vvi ppo mtr cre ghi cit hvu sot bra sbi tae nta bna
Paralog 1 2 2 2 3 3 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (658 genes)  IEA  
GO CC
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (44 genes)  IEA  
Protein XP_003570492.1 [sequence] [blastp]
XP_024316839.1 [sequence] [blastp]
XP_024316840.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_003570492.1)
chlo 7,  mito 1,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_024316839.1)
chlo 7,  mito 1,  cyto 1,  plas 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_024316840.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_003570492.1)
mito 8,  other 3  (predict for XP_024316839.1)
mito 8,  other 3  (predict for XP_024316840.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835947

.
osa-u.5
for
4347165

.
osa-u.5
for
4330924

.
zma-u.5
for
100272705

.
zma-u.5
for
103632812

.
ath-u.5
for
AT3G42950

.
ath-u.5
for
AT1G19170

.
gma-u.5
for
100800910

.
gma-u.5
for
100818529

.
gma-u.5
for
100801914

.
sly-u.5
for
101253071

.
sly-u.5
for
101252957

.
sly-u.5
for
101248218

.
vvi-u.5
for
100249126

.
ppo-u.5
for
7490535

.
ppo-u.5
for
18100310

.
mtr-u.5
for
11441243

.
mtr-u.5
for
11418613

.


Ortholog ID: 3344
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta
Symbol AT3G42950 AT1G19170 LOC100818529 LOC100801914 LOC101252957 LOC101253071 LOC4347165 LOC4330924 LOC100272705 LOC103632812 LOC103870855 LOC103835862 LOC100249126 LOC18100310 LOC7490535 LOC11441243 LOC11418613 LOC123103759 LOC123145769 LOC123397503 LOC123403436 LOC107907090 LOC107958844 LOC106453021 LOC106453061 LOC8062741 LOC8081943 LOC102592519 LOC102580373 LOC102606758 LOC100835947 LOC100830363 LOC107789313
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase uncharacterized LOC100272705 probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase probable polygalacturonase putative polygalacturonase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00061 Fatty acid biosynthesis 2
gma01212 Fatty acid metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa01232 Nucleotide metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 2
zma00860 Porphyrin metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 4
ppo01230 Biosynthesis of amino acids 4
ppo00270 Cysteine and methionine metabolism 4
ppo01200 Carbon metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 8
ppo00670 One carbon pool by folate 7
ppo01240 Biosynthesis of cofactors 5
ppo00270 Cysteine and methionine metabolism 5
ppo00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 4
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna01232 Nucleotide metabolism 4
bna00510 N-Glycan biosynthesis 3
bna04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00240 Pyrimidine metabolism 3
bna01232 Nucleotide metabolism 3
bna00510 N-Glycan biosynthesis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 4
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03060 Protein export 3
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 7
nta00270 Cysteine and methionine metabolism 6
nta00450 Selenocompound metabolism 6
nta00670 One carbon pool by folate 3
nta01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823351 838500 100818529 100801914 101252957 101253071 4347165 4330924 100272705 103632812 103870855 103835862 100249126 18100310 7490535 11441243 11418613 123103759 123145769 123397503 123403436 107907090 107958844 106453021 106453061 8062741 8081943 102592519 102580373 102606758 100835947 100830363 107789313
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