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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100836842   chlorophyll a-b binding protein of LHCII type III, chloroplastic 
 osa-u.5   4343604   chlorophyll a-b binding protein of LHCII type III, chloroplastic 
 zma-u.5   100284154   chlorophyll a-b binding protein of LHCII type III 
 ath-u.5   LHCB3   light-harvesting chlorophyll B-binding protein 3 
 gma-u.5   100790960   chlorophyll a-b binding protein 13, chloroplastic-like 
 gma-u.5   100779387   chlorophyll a-b binding protein 13, chloroplastic-like 
 sly-u.5   101268123   chlorophyll a-b binding protein 13, chloroplastic-like 
 sly-u.5   CAB13   chlorophyll a-b binding protein 13, chloroplastic 
 vvi-u.5   100260599   chlorophyll a-b binding protein 13, chloroplastic 
 ppo-u.5   18095653   chlorophyll a-b binding protein 13, chloroplastic 
 mtr-u.5   11405314   chlorophyll a-b binding protein 13, chloroplastic 

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Top 50 coexpressed genes to 100836842 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100836842 (bdi-r.1 coexpression data)

CoexMap"100836842"


bdiLOC100836842 | Entrez gene ID : 100836842      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00196 [list] [network] Photosynthesis - antenna proteins (18 genes)
GO BP
GO:0009768 [list] [network] photosynthesis, light harvesting in photosystem I  (18 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (106 genes)  IEA  
GO CC
GO:0010287 [list] [network] plastoglobule  (11 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (72 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (100 genes)  IEA  
GO MF
Protein XP_003562898.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003562898.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for XP_003562898.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100836842
osa-u.5
for
4343604
zma-u.5
for
100284154
ath-u.5
for
LHCB3
gma-u.5
for
100790960
gma-u.5
for
100779387
sly-u.5
for
101268123
sly-u.5
for
CAB13
vvi-u.5
for
100260599
ppo-u.5
for
18095653
mtr-u.5
for
11405314


Ortholog ID: 6998
Species bdi tae tae hvu osa zma sbi ath gma gma sly sly bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta
Symbol LOC100836842 LOC123188262 LOC123148365 LOC123425700 LOC4343604 LOC100284154 LOC8081748 LHCB3 LOC100779387 LOC100790960 CAB13 LOC101268123 LOC103844887 LOC100260599 LOC18095653 LOC11405314 LOC107903531 LOC107948618 LOC111198551 LOC106380936 LOC102586284 LOC102584787 LOC102625194 LOC107790089 LOC107793205
Function* chlorophyll a-b binding protein of LHCII type III, chloroplastic chlorophyll a-b binding protein of LHCII type III, chloroplastic chlorophyll a-b binding protein of LHCII type III, chloroplastic chlorophyll a-b binding protein of LHCII type III, chloroplastic chlorophyll a-b binding protein of LHCII type III, chloroplastic chlorophyll a-b binding protein of LHCII type III chlorophyll a-b binding protein of LHCII type III, chloroplastic light-harvesting chlorophyll B-binding protein 3 chlorophyll a-b binding protein 13, chloroplastic-like chlorophyll a-b binding protein 13, chloroplastic-like chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic-like chlorophyll a-b binding protein 3, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 3, chloroplastic chlorophyll a-b binding protein 3, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic chlorophyll a-b binding protein 13, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 14
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 13
tae00195 Photosynthesis 6
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00196 Photosynthesis - antenna proteins 11
hvu00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 10
osa00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 16
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 13
sbi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00196 Photosynthesis - antenna proteins 10
ath00195 Photosynthesis 7
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 12
sly00860 Porphyrin metabolism 3
sly00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00196 Photosynthesis - antenna proteins 17
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 12
bra00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 10
vvi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 10
ppo00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 7
mtr00195 Photosynthesis 5
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 15
sot00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 14
sot00860 Porphyrin metabolism 4
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00196 Photosynthesis - antenna proteins 6
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100836842 123188262 123148365 123425700 4343604 100284154 8081748 835515 100779387 100790960 101243766 101268123 103844887 100260599 18095653 11405314 107903531 107948618 111198551 106380936 102586284 102584787 102625194 107790089 107793205
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