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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100837000   DNA polymerase I 
 osa-u.5   4332131   uncharacterized LOC4332131 
 zma-u.5   100285516   DNA polymerase I 
 ath-u.5   AT3G52050   5'-3' exonuclease family protein 
 gma-u.5   100811786   DNA polymerase I, thermostable 
 gma-u.5   100792557   flap endonuclease Xni 
 sly-u.5   101265105   uncharacterized LOC101265105 
 vvi-u.5   100242452   uncharacterized LOC100242452 
 ppo-u.5   18104577   uncharacterized LOC18104577 
 mtr-u.5   11445111   DNA polymerase I, thermostable 

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Top 50 coexpressed genes to 100837000 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100837000 (bdi-r.1 coexpression data)

CoexMap"100837000"


bdiLOC100837000 | Entrez gene ID : 100837000      
Species bdi osa zma ath gma sly vvi ppo mtr sot hvu tae cit sbi ghi cre bna nta bra
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0033567 [list] [network] DNA replication, Okazaki fragment processing  (2 genes)  IEA  
GO CC
GO MF
GO:0017108 [list] [network] 5'-flap endonuclease activity  (14 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003558425.1 [sequence] [blastp]
XP_010228926.2 [sequence] [blastp]
XP_014752949.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 4  (predict for XP_003558425.1)
chlo 9,  mito 1  (predict for XP_010228926.2)
chlo 9,  mito 1  (predict for XP_014752949.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_003558425.1)
chlo 1  (predict for XP_010228926.2)
chlo 8,  mito 3  (predict for XP_014752949.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100837000

.
osa-u.5
for
4332131

.
zma-u.5
for
100285516

.
ath-u.5
for
AT3G52050

.
gma-u.5
for
100811786

.
gma-u.5
for
100792557

.
sly-u.5
for
101265105

.
vvi-u.5
for
100242452

.
ppo-u.5
for
18104577

.
mtr-u.5
for
11445111

.


Ortholog ID: 10145
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G52050 LOC100811786 LOC100792557 LOC101265105 LOC4332131 LOC100285516 LOC103841138 LOC100242452 LOC18104577 LOC11445111 LOC123098152 LOC123092866 LOC123449230 LOC107910270 LOC107950998 LOC106367855 LOC106402677 CHLRE_03g205809v5 LOC8056844 LOC102600473 LOC102609974 LOC100837000 LOC107832360 LOC107796316
Function* 5'-3' exonuclease family protein DNA polymerase I, thermostable flap endonuclease Xni uncharacterized LOC101265105 uncharacterized LOC4332131 DNA polymerase I flap endonuclease Xni uncharacterized LOC100242452 uncharacterized LOC18104577 DNA polymerase I, thermostable DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I DNA polymerase I uncharacterized protein flap endonuclease Xni DNA polymerase I uncharacterized LOC102609974 DNA polymerase I uncharacterized LOC107832360 uncharacterized LOC107796316
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae03410 Base excision repair 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
tae04981 Folate transport and metabolism 2
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit00020 Citrate cycle (TCA cycle) 2
cit00620 Pyruvate metabolism 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00260 Glycine, serine and threonine metabolism 2
bdi00290 Valine, leucine and isoleucine biosynthesis 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824368 100811786 100792557 101265105 4332131 100285516 103841138 100242452 18104577 11445111 123098152 123092866 123449230 107910270 107950998 106367855 106402677 5724942 8056844 102600473 102609974 100837000 107832360 107796316
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