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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100829029   COBRA-like protein 5 
 bdi-r.1   100823628   COBRA-like protein 1 
 bdi-r.1   100829328   COBRA-like protein 2 
 tae-r.2   123091177   COBRA-like protein 2 
 tae-r.2   123086798   COBRA-like protein 2 
 tae-r.2   123080161   COBRA-like protein 1 
 hvu-r.1   123452279   COBRA-like protein 3 
 hvu-r.1   123447814   COBRA-like protein 2 
 hvu-r.1   123442574   COBRA-like protein 5 
 osa-u.5   4343845   COBRA-like protein 6 
 osa-u.5   4343844   COBRA-like protein 1 
 zma-u.5   541793   brittle stalk-2-like protein 3 
 zma-u.5   100037800   brittle stalk-2-like protein 7 
 zma-u.5   100037799   brittle stalk-2-like protein 6 
 sbi-r.1   8085923   COBRA-like protein 3 
 sbi-r.1   8070042   COBRA-like protein 5 
 ath-u.5   COB   COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 
 ath-u.5   COBL6   COBRA-like protein 6 precursor 
 ath-u.5   IRX6   COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 
 gma-u.5   100815779   protein COBRA 
 gma-u.5   100811581   protein COBRA 
 gma-u.5   100815926   protein COBRA 
 sly-u.5   101260119   COBRA-like protein 4 
 sly-u.5   101260090   COBRA-like protein 6 
 sly-u.5   101253146   COBRA-like protein 4 
 bra-r.6   103875066   COBRA-like protein 2 
 bra-r.6   103836309   COBRA-like protein 6 
 bra-r.6   103849801   COBRA-like protein 2 
 vvi-u.5   100258803   COBRA-like protein 4 
 vvi-u.5   100263971   protein COBRA 
 ppo-u.5   7480590   COBRA-like protein 2 
 mtr-u.5   25495418   COBRA-like protein 1 
 mtr-u.5   25495419   protein COBRA 
 ghi-r.1   107894246   COBRA-like protein 6 
 ghi-r.1   107892008   COBRA-like protein 4 
 ghi-r.1   107912686   COBRA-like protein 4 
 bna-r.1   106432032   COBRA-like protein 4 
 bna-r.1   106411053   protein COBRA 
 bna-r.1   106410940   COBRA-like protein 2 
 sot-r.1   102590522   COBRA-like protein 4 
 cit-r.1   102609762   protein COBRA-like 
 cit-r.1   102610075   COBRA-like protein 4 
 nta-r.1   107807501   protein COBRA-like 
 nta-r.1   107768224   protein COBRA-like 
 nta-r.1   107763917   COBRA-like protein 6 

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Top 50 coexpressed genes to 100829029 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100829029 (bdi-r.1 coexpression data)

CoexMap"100837454"


bdiLOC100837454 | Entrez gene ID : 100837454      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 2 3 2 3 3 3 3 2 1 2 3 3 1 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0052324 [list] [network] plant-type cell wall cellulose biosynthetic process  (7 genes)  IEA  
GO:0010215 [list] [network] cellulose microfibril organization  (10 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (914 genes)  IEA  
GO MF
Protein XP_003581468.2 [sequence] [blastp]
XP_014750977.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  nucl 1,  plas 1,  cyto_mito 1,  nucl_plas 1  (predict for XP_003581468.2)
chlo 7,  vacu 2  (predict for XP_014750977.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for XP_003581468.2)
mito 8  (predict for XP_014750977.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100829029
bdi-r.1
for
100823628
bdi-r.1
for
100829328
tae-r.2
for
123091177
tae-r.2
for
123086798
tae-r.2
for
123080161
hvu-r.1
for
123452279
hvu-r.1
for
123447814
hvu-r.1
for
123442574
osa-u.5
for
4343845
osa-u.5
for
4343844
zma-u.5
for
541793
zma-u.5
for
100037800
zma-u.5
for
100037799
sbi-r.1
for
8085923
sbi-r.1
for
8070042
ath-u.5
for
COB
ath-u.5
for
COBL6
ath-u.5
for
IRX6
gma-u.5
for
100815779
gma-u.5
for
100811581
gma-u.5
for
100815926
sly-u.5
for
101260119
sly-u.5
for
101260090
sly-u.5
for
101253146
bra-r.6
for
103875066
bra-r.6
for
103836309
bra-r.6
for
103849801
vvi-u.5
for
100258803
vvi-u.5
for
100263971
ppo-u.5
for
7480590
mtr-u.5
for
25495418
mtr-u.5
for
25495419
ghi-r.1
for
107894246
ghi-r.1
for
107892008
ghi-r.1
for
107912686
bna-r.1
for
106432032
bna-r.1
for
106411053
bna-r.1
for
106410940
sot-r.1
for
102590522
cit-r.1
for
102609762
cit-r.1
for
102610075
nta-r.1
for
107807501
nta-r.1
for
107768224
nta-r.1
for
107763917


Ortholog ID: 307
Species bdi tae tae tae hvu hvu hvu osa osa osa zma zma zma sbi sbi ath ath ath gma gma gma sly sly sly bra bra vvi vvi vvi ppo ppo mtr mtr ghi ghi bna bna bna sot sot sot cit cit nta nta nta
Symbol LOC100823628 LOC123105056 LOC123188006 LOC123128916 LOC123447814 LOC123429721 LOC123403280 LOC4343845 LOC4343844 LOC4333114 LOC541793 LOC100037799 LOC100037798 LOC8085923 LOC8070042 COB COBL6 COBL2 LOC100815926 LOC100782876 LOC100783410 LOC101253146 COBRA-like LOC112940047 LOC103856152 LOC103860552 LOC100263971 LOC100263436 LOC100244586 LOC7480590 LOC7480591 LOC25495418 LOC25495419 LOC107951886 LOC107955737 LOC106399754 LOC106362383 LOC106346245 LOC102584372 LOC102604326 LOC102598920 LOC102609762 LOC102610075 LOC107807501 LOC107806738 LOC107807502
Function* COBRA-like protein 1 COBRA-like protein 3 COBRA-like protein 1 COBRA-like protein 3 COBRA-like protein 2 COBRA-like protein 6 COBRA-like protein 3 COBRA-like protein 6 COBRA-like protein 1 COBRA-like protein 5 brittle stalk-2-like protein 3 brittle stalk-2-like protein 6 brittle stalk-2-like protein 4 COBRA-like protein 3 COBRA-like protein 5 COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family COBRA-like protein 6 precursor COBRA-like protein 2 precursor protein COBRA protein COBRA-like COBRA-like protein 4-like COBRA-like protein 4 protein COBRA-like COBRA-like protein 6 COBRA-like protein 4 protein COBRA protein COBRA protein COBRA COBRA-like protein 4 COBRA-like protein 2 COBRA-like protein 4 COBRA-like protein 1 protein COBRA COBRA-like protein 1 COBRA-like protein 2 COBRA-like protein 2 COBRA-like protein 6 COBRA-like protein 6 COBRA-like protein 4 COBRA-like protein 4 COBRA-like protein 4 protein COBRA-like COBRA-like protein 4 protein COBRA-like COBRA-like protein 4 COBRA-like protein 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 4
bra01250 Biosynthesis of nucleotide sugars 3
bra00053 Ascorbate and aldarate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100823628 123105056 123188006 123128916 123447814 123429721 123403280 4343845 4343844 4333114 541793 100037799 100037798 8085923 8070042 836213 837508 822697 100815926 100782876 100783410 101253146 101251844 112940047 103856152 103860552 100263971 100263436 100244586 7480590 7480591 25495418 25495419 107951886 107955737 106399754 106362383 106346245 102584372 102604326 102598920 102609762 102610075 107807501 107806738 107807502
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