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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SPCH   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   SPCH1   transcription factor SPEECHLESS 
 gma-u.5   SPCH2   transcription factor SPEECHLESS-like 
 sly-u.5   101256653   transcription factor SPEECHLESS 
 bra-r.6   103852045   transcription factor SPEECHLESS 
 bra-r.6   103844802   transcription factor SPEECHLESS 
 ghi-r.1   107947261   transcription factor SPEECHLESS 
 ghi-r.1   107942308   transcription factor SPEECHLESS 
 nta-r.1   107765572   transcription factor SPEECHLESS-like 
 nta-r.1   107784398   transcription factor SPEECHLESS-like 

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Top 50 coexpressed genes to SPCH (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPCH (ath-u.5 coexpression data)

CoexMap"100837792"


bdiLOC100837792 | Entrez gene ID : 100837792      
Species ath gma sly bra ghi nta sot zma cre ppo sbi cit tae mtr osa hvu bna vvi bdi
Paralog 1 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04016 [list] [network] MAPK signaling pathway - plant (145 genes)
GO BP
GO:0010052 [list] [network] guard cell differentiation  (16 genes)  IEA  
GO:0010374 [list] [network] stomatal complex development  (16 genes)  IEA  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (210 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (396 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1057 genes)  IEA  
Protein XP_003571175.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  plas 1,  chlo 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1  (predict for XP_003571175.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003571175.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
SPCH
gma-u.5
for
SPCH1
gma-u.5
for
SPCH2
sly-u.5
for
101256653
bra-r.6
for
103852045
bra-r.6
for
103844802
ghi-r.1
for
107947261
ghi-r.1
for
107942308
nta-r.1
for
107765572
nta-r.1
for
107784398


Ortholog ID: 5184
Species ath gma gma sly bra bra ghi ghi nta nta
Symbol SPCH SPCH1 SPCH2 LOC101256653 LOC103852045 LOC103844802 LOC107947261 LOC107942308 LOC107765572 LOC107784398
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS transcription factor SPEECHLESS-like transcription factor SPEECHLESS-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835402 100777437 100808130 101256653 103852045 103844802 107947261 107942308 107765572 107784398
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