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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100838824   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 tae-r.2   123097818   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 tae-r.2   123092504   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 tae-r.2   123085533   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 hvu-r.1   123448949   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 osa-u.5   4332471   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 zma-u.5   103639281   pentatricopeptide repeat-containing protein, chloroplastic-like 
 sbi-r.1   8081449   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 ath-u.5   AT5G02830   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100805564   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 gma-u.5   100794606   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 sly-u.5   101261059   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 bra-r.6   103847423   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 vvi-u.5   100260184   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 ppo-u.5   18100244   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 mtr-u.5   11430650   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 ghi-r.1   107948338   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 ghi-r.1   107897996   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 bna-r.1   125579111   pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like 
 bna-r.1   106450518   pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like 
 bna-r.1   106372605   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 sot-r.1   102578424   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 cit-r.1   102617778   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 nta-r.1   107791524   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 
 nta-r.1   107786354   pentatricopeptide repeat-containing protein At5g02830, chloroplastic 

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Top 50 coexpressed genes to 100838824 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100838824 (bdi-r.1 coexpression data)

CoexMap"100838824"


bdiLOC100838824 | Entrez gene ID : 100838824      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003558181.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo 4  (predict for XP_003558181.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003558181.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100838824
tae-r.2
for
123097818
tae-r.2
for
123092504
tae-r.2
for
123085533
hvu-r.1
for
123448949
osa-u.5
for
4332471
zma-u.5
for
103639281
sbi-r.1
for
8081449
ath-u.5
for
AT5G02830
gma-u.5
for
100805564
gma-u.5
for
100794606
sly-u.5
for
101261059
bra-r.6
for
103847423
vvi-u.5
for
100260184
ppo-u.5
for
18100244
mtr-u.5
for
11430650
ghi-r.1
for
107948338
ghi-r.1
for
107897996
bna-r.1
for
125579111
bna-r.1
for
106450518
bna-r.1
for
106372605
sot-r.1
for
102578424
cit-r.1
for
102617778
nta-r.1
for
107791524
nta-r.1
for
107786354


Ortholog ID: 10308
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100838824 LOC123097818 LOC123092504 LOC123085533 LOC123448949 LOC4332471 LOC103639281 LOC8081449 AT5G02830 LOC100805564 LOC100794606 LOC101261059 LOC103847423 LOC100260184 LOC18100244 LOC11430650 LOC107948338 LOC107897996 LOC125579111 LOC106450518 LOC106372605 LOC102578424 LOC102617778 LOC107791524 LOC107786354
Function* pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic-like pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic pentatricopeptide repeat-containing protein At5g02830, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00710 Carbon fixation by Calvin cycle 4
ppo01230 Biosynthesis of amino acids 3
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838824 123097818 123092504 123085533 123448949 4332471 103639281 8081449 831772 100805564 100794606 101261059 103847423 100260184 18100244 11430650 107948338 107897996 125579111 106450518 106372605 102578424 102617778 107791524 107786354
The preparation time of this page was 1.2 [sec].