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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100840196   probable E3 ubiquitin-protein ligase RHC1A 
 osa-u.5   4327967   probable E3 ubiquitin-protein ligase RHC1A 
 zma-u.5   100194242   uncharacterized LOC100194242 
 zma-u.5   100282497   uncharacterized LOC100282497 

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Top 50 coexpressed genes to 100840196 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100840196 (bdi-r.1 coexpression data)

CoexMap"100840196"


bdiLOC100840196 | Entrez gene ID : 100840196      
Species bdi osa zma bra gma ath ppo sbi ghi sot nta cre tae mtr hvu vvi cit bna sly
Paralog 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (411 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (193 genes)  IEA  
Protein XP_003564415.1 [sequence] [blastp]
XP_010232461.1 [sequence] [blastp]
XP_010232462.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  mito 3,  cyto_mito 2  (predict for XP_003564415.1)
nucl 6,  chlo 3  (predict for XP_010232461.1)
nucl 6,  cyto_nucl 4,  mito 3,  cyto_mito 2  (predict for XP_010232462.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_003564415.1)
chlo 9  (predict for XP_010232461.1)
mito 7,  other 3  (predict for XP_010232462.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100840196
osa-u.5
for
4327967
zma-u.5
for
100194242
zma-u.5
for
100282497


Ortholog ID: 16204
Species bdi tae tae hvu osa zma zma sbi
Symbol LOC100840196 LOC123079458 LOC123062326 LOC123444626 LOC4327967 LOC100282497 LOC100194242 LOC110433405
Function* probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A probable E3 ubiquitin-protein ligase RHC1A uncharacterized LOC100282497 uncharacterized LOC100194242 probable E3 ubiquitin-protein ligase RHC1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04814 Motor proteins 4
osa04145 Phagosome 3
osa04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04120 Ubiquitin mediated proteolysis 2
zma00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100840196 123079458 123062326 123444626 4327967 100282497 100194242 110433405
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