ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100840855	calmodulin-binding protein 60 D
bdi-r.1	100846328	calmodulin-binding protein 60 B
bdi-r.1	100835614	calmodulin-binding protein 60 A
tae-r.2	123105718	calmodulin-binding protein 60 A
tae-r.2	123137217	calmodulin-binding protein 60 B
hvu-r.1	123453101	calmodulin-binding protein 60 A-like
hvu-r.1	123426811	calmodulin-binding protein 60 D-like
osa-u.5	4325688	protein SAR DEFICIENT 1
osa-u.5	4328487	calmodulin-binding protein 60 C
osa-u.5	107276160	protein SAR DEFICIENT 1
zma-u.5	100283672	calmodulin binding protein
zma-u.5	100285136	calmodulin binding protein
zma-u.5	100286080	uncharacterized LOC100286080
sbi-r.1	8066356	calmodulin-binding protein 60 D
sbi-r.1	8071013	protein SAR DEFICIENT 1
ath-u.5	AT2G18750	Calmodulin-binding protein
ath-u.5	SARD1	Calmodulin binding protein-like protein
ath-u.5	AT5G62570	Calmodulin binding protein-like protein
gma-u.5	100804548	calmodulin-binding protein 60 A
gma-u.5	100805759	calmodulin-binding protein 60 D
gma-u.5	100806393	calmodulin-binding protein 60 B
sly-u.5	101268806	calmodulin-binding protein 60 D
sly-u.5	101267354	calmodulin-binding protein 60 B
sly-u.5	101256262	protein SAR DEFICIENT 1-like
bra-r.6	103831855	protein SAR DEFICIENT 1
bra-r.6	103830730	protein SAR DEFICIENT 1
bra-r.6	103854686	calmodulin-binding protein 60 G
vvi-u.5	104881366	calmodulin-binding protein 60 B
vvi-u.5	100264980	calmodulin-binding protein 60 B
vvi-u.5	100242382	protein SAR DEFICIENT 1
ppo-u.5	18097458	calmodulin-binding protein 60 B
ppo-u.5	7475643	protein SAR DEFICIENT 1
ppo-u.5	7478912	calmodulin-binding protein 60 B
mtr-u.5	11436711	protein SAR DEFICIENT 1
mtr-u.5	11443585	calmodulin-binding protein 60 A
mtr-u.5	11423826	calmodulin-binding protein 60 D
ghi-r.1	107930958	protein SAR DEFICIENT 1
ghi-r.1	107926271	calmodulin-binding protein 60 B
ghi-r.1	107925256	calmodulin-binding protein 60 D
bna-r.1	125575859	calmodulin-binding protein 60 C-like
bna-r.1	125579185	calmodulin-binding protein 60 B-like
bna-r.1	111207571	calmodulin-binding protein 60 G
sot-r.1	102585109	protein SAR DEFICIENT 1
sot-r.1	102596740	calmodulin-binding protein 60 C
sot-r.1	102604313	protein SAR DEFICIENT 1-like
cit-r.1	102612087	protein SAR DEFICIENT 1-like
cit-r.1	102614233	calmodulin-binding protein 60 B-like
cit-r.1	102625149	hypothetical protein
nta-r.1	107831052	calmodulin-binding protein 60 B
nta-r.1	107830019	protein SAR DEFICIENT 1
nta-r.1	107804452	calmodulin-binding protein 60 B

Top 50 coexpressed genes to 100840855 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100840855 (bdi-r.1 coexpression data)

CoexMap"100840855"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0080142 [list] [network] regulation of salicylic acid biosynthetic process

(12 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(2880 genes)

IEA

GO MF

GO:0005516 [list] [network] calmodulin binding	(70 genes)	IEA
GO:0043565 [list] [network] sequence-specific DNA binding	(648 genes)	IEA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1057 genes)	IEA

Protein

XP_010228724.1 [sequence] [blastp]
XP_014753421.1 [sequence] [blastp]
XP_014753423.1 [sequence] [blastp]
XP_014753424.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, chlo 3, E.R. 2, cysk_nucl 2, mito 1, vacu 1	(predict for XP_010228724.1)
chlo 4, nucl 2, cysk_nucl 1, E.R. 1, mito 1, extr 1, vacu 1, E.R._plas 1, cyto_E.R. 1	(predict for XP_014753421.1)
chlo 3, nucl 2, cysk_nucl 1, cyto 1, mito 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1, cyto_pero 1, cyto_plas 1	(predict for XP_014753423.1)
chlo 3, cyto 2, nucl 1, chlo_mito 1, cyto_E.R. 1	(predict for XP_014753424.1)

Subcellular
localization
TargetP

other 8	(predict for XP_010228724.1)
other 9	(predict for XP_014753421.1)
other 8	(predict for XP_014753423.1)
other 8	(predict for XP_014753424.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100840855	bdi-r.1 for 100846328	bdi-r.1 for 100835614	tae-r.2 for 123105718	tae-r.2 for 123137217	hvu-r.1 for 123453101	hvu-r.1 for 123426811	osa-u.5 for 4325688	osa-u.5 for 4328487	osa-u.5 for 107276160	zma-u.5 for 100283672	zma-u.5 for 100285136	zma-u.5 for 100286080	sbi-r.1 for 8066356	sbi-r.1 for 8071013	ath-u.5 for AT2G18750	ath-u.5 for SARD1	ath-u.5 for AT5G62570	gma-u.5 for 100804548	gma-u.5 for 100805759	gma-u.5 for 100806393	sly-u.5 for 101268806	sly-u.5 for 101267354	sly-u.5 for 101256262	bra-r.6 for 103831855	bra-r.6 for 103830730	bra-r.6 for 103854686	vvi-u.5 for 104881366	vvi-u.5 for 100264980	vvi-u.5 for 100242382	ppo-u.5 for 18097458	ppo-u.5 for 7475643	ppo-u.5 for 7478912	mtr-u.5 for 11436711	mtr-u.5 for 11443585	mtr-u.5 for 11423826	ghi-r.1 for 107930958	ghi-r.1 for 107926271	ghi-r.1 for 107925256	bna-r.1 for 125575859	bna-r.1 for 125579185	bna-r.1 for 111207571	sot-r.1 for 102585109	sot-r.1 for 102596740	sot-r.1 for 102604313	cit-r.1 for 102612087	cit-r.1 for 102614233	cit-r.1 for 102625149	nta-r.1 for 107831052	nta-r.1 for 107830019	nta-r.1 for 107804452

Ortholog

Ortholog ID: 166

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

calmodulin-binding protein 60 D

calmodulin-binding protein 60 A

calmodulin-binding protein 60 B

calmodulin-binding protein 60 B-like

calmodulin-binding protein 60 D-like

protein SAR DEFICIENT 1

calmodulin-binding protein 60 C

calmodulin-binding protein 60 D

calmodulin binding protein

Protein SAR DEFICIENT 1

Calmodulin-binding protein 60 C

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

Calmodulin-binding protein

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

protein SAR DEFICIENT 1-like

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 C

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

calmodulin-binding protein 60 A

calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 A

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 D

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

calmodulin-binding protein 60 C

calmodulin-binding protein 60 B

calmodulin-binding protein 60 D

protein SAR DEFICIENT 1

protein SAR DEFICIENT 1-like

calmodulin-binding protein 60 A

protein SAR DEFICIENT 1-like

calmodulin-binding protein 60 A

calmodulin-binding protein 60 B

protein SAR DEFICIENT 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	3
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	2
sbi00410	beta-Alanine metabolism	2
sbi00770	Pantothenate and CoA biosynthesis	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	6
vvi04016	MAPK signaling pathway - plant	4
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo04626	Plant-pathogen interaction	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	3
cit04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00760	Nicotinate and nicotinamide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00905	Brassinosteroid biosynthesis	3

Expression

Expression pattern

Entrez Gene ID^*

100840855

100835614

100822237

123076922

123406352

123404800

4325688

4328487

4332576

100283672

103649824

103653644

8066356

8079393

816390

835862

828685

100812605

100816427

100798493

101268806

101256262

101255950

103831855

103874061

103863555

100264980

100255354

100256775

18097458

7478912

7453751

11421955

25496840

120575779

107925256

107914004

107886116

106430980

106397962

106346511

102585109

102604313

102583829

102612087

102629177

107831052

107830019

107800838

The preparation time of this page was 0.1 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	3	3	2	3	3	3	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100840855 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100840855 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**