ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bdi-r.1	100843114	probable glucuronosyltransferase Os04g0398600
bdi-r.1	100835653	probable glucuronosyltransferase Os02g0520750
bdi-r.1	100830089	probable glucuronosyltransferase Os01g0926400
bdi-r.1	100830399	probable glucuronosyltransferase Os01g0926600
tae-r.2	123063183	probable glucuronosyltransferase Os01g0926400
tae-r.2	123063185	probable glucuronosyltransferase Os01g0926600
tae-r.2	123045347	probable glucuronosyltransferase Os04g0398600
hvu-r.1	123426591	probable glucuronosyltransferase Os04g0398600
hvu-r.1	123445303	probable glucuronosyltransferase Os01g0926400
hvu-r.1	123399886	probable glucuronosyltransferase Os02g0520750
osa-u.5	4327243	probable glucuronosyltransferase Os01g0926700
osa-u.5	4327240	probable glucuronosyltransferase Os01g0926400
osa-u.5	4348204	probable glucuronosyltransferase GUT1
zma-u.5	100281324	uncharacterized LOC100281324
zma-u.5	103644630	probable beta-1,4-xylosyltransferase IRX10L
zma-u.5	100274514	uncharacterized LOC100274514
sbi-r.1	8079829	probable glucuronosyltransferase Os01g0926400
sbi-r.1	8059387	probable glucuronosyltransferase Os01g0926600
sbi-r.1	8072543	probable glucuronosyltransferase Os01g0926700
ath-u.5	GUT1	Exostosin family protein
ath-u.5	GUT2	Exostosin family protein
gma-u.5	100800085	probable beta-1,4-xylosyltransferase IRX10L
gma-u.5	100797122	probable beta-1,4-xylosyltransferase IRX10L
gma-u.5	100812747	probable beta-1,4-xylosyltransferase IRX10L
sly-u.5	101250897	probable beta-1,4-xylosyltransferase IRX10L
sly-u.5	101252560	probable beta-1,4-xylosyltransferase IRX10L
sly-u.5	101253484	probable beta-1,4-xylosyltransferase IRX10L
bra-r.6	103873464	probable beta-1,4-xylosyltransferase IRX10L
bra-r.6	103835395	probable beta-1,4-xylosyltransferase IRX10
bra-r.6	103829057	probable beta-1,4-xylosyltransferase IRX10
vvi-u.5	100852698	probable beta-1,4-xylosyltransferase IRX10L
vvi-u.5	100242415	probable beta-1,4-xylosyltransferase IRX10L
ppo-u.5	7484893	probable beta-1,4-xylosyltransferase IRX10L
mtr-u.5	25501977	probable beta-1,4-xylosyltransferase IRX10L
mtr-u.5	25501976	probable beta-1,4-xylosyltransferase IRX10L
ghi-r.1	107946892	probable beta-1,4-xylosyltransferase IRX10L
ghi-r.1	107946622	probable beta-1,4-xylosyltransferase IRX10L
ghi-r.1	107946188	probable beta-1,4-xylosyltransferase IRX10
bna-r.1	106425347	probable beta-1,4-xylosyltransferase IRX10
bna-r.1	106358025	probable beta-1,4-xylosyltransferase IRX10
bna-r.1	106361900	probable beta-1,4-xylosyltransferase IRX10
sot-r.1	102580860	probable beta-1,4-xylosyltransferase IRX10L
sot-r.1	102591657	probable beta-1,4-xylosyltransferase IRX10L
sot-r.1	102589001	probable beta-1,4-xylosyltransferase IRX10L
cit-r.1	102621033	probable beta-1,4-xylosyltransferase IRX10L
cit-r.1	102621903	probable beta-1,4-xylosyltransferase IRX10
nta-r.1	107817639	putative beta-1,4-xylosyltransferase IRX10L
nta-r.1	107809178	putative beta-1,4-xylosyltransferase IRX10
nta-r.1	107804304	putative beta-1,4-xylosyltransferase IRX10L

Top 50 coexpressed genes to 100843114 (bdi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100843114 (bdi-r.1 coexpression data)

CoexMap"100843114"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010417 [list] [network] glucuronoxylan biosynthetic process	(15 genes)	IEA
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis	(20 genes)	IEA

GO CC

GO MF

GO:0016757 [list] [network] glycosyltransferase activity

(566 genes)

IEA

Protein

XP_003579636.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, vacu 2, nucl_plas 2, cysk_plas 2, mito_plas 2, cyto_plas 2

(predict for XP_003579636.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003579636.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100843114	bdi-r.1 for 100835653	bdi-r.1 for 100830089	bdi-r.1 for 100830399	tae-r.2 for 123063183	tae-r.2 for 123063185	tae-r.2 for 123045347	hvu-r.1 for 123426591	hvu-r.1 for 123445303	hvu-r.1 for 123399886	osa-u.5 for 4327243	osa-u.5 for 4327240	osa-u.5 for 4348204	zma-u.5 for 100281324	zma-u.5 for 103644630	zma-u.5 for 100274514	sbi-r.1 for 8079829	sbi-r.1 for 8059387	sbi-r.1 for 8072543	ath-u.5 for GUT1	ath-u.5 for GUT2	gma-u.5 for 100800085	gma-u.5 for 100797122	gma-u.5 for 100812747	sly-u.5 for 101250897	sly-u.5 for 101252560	sly-u.5 for 101253484	bra-r.6 for 103873464	bra-r.6 for 103835395	bra-r.6 for 103829057	vvi-u.5 for 100852698	vvi-u.5 for 100242415	ppo-u.5 for 7484893	mtr-u.5 for 25501977	mtr-u.5 for 25501976	ghi-r.1 for 107946892	ghi-r.1 for 107946622	ghi-r.1 for 107946188	bna-r.1 for 106425347	bna-r.1 for 106358025	bna-r.1 for 106361900	sot-r.1 for 102580860	sot-r.1 for 102591657	sot-r.1 for 102589001	cit-r.1 for 102621033	cit-r.1 for 102621903	nta-r.1 for 107817639	nta-r.1 for 107809178	nta-r.1 for 107804304

Ortholog

Ortholog ID: 1026

Species

bdi

tae

hvu

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

GUT1

GUT2

Function^*

probable glucuronosyltransferase Os04g0398600

probable glucuronosyltransferase Os02g0520750

probable glucuronosyltransferase Os01g0926400

probable glucuronosyltransferase Os04g0398600

probable glucuronosyltransferase Os01g0926600

probable glucuronosyltransferase Os01g0926400

probable glucuronosyltransferase Os04g0398600

probable glucuronosyltransferase Os01g0926400

probable glucuronosyltransferase Os01g0926600

probable glucuronosyltransferase Os01g0926400

probable glucuronosyltransferase GUT1

probable glucuronosyltransferase Os02g0520750

uncharacterized LOC100282889

putative beta-14-xylosyltransferase IRX10L

uncharacterized LOC100191546

probable glucuronosyltransferase Os01g0926700

probable glucuronosyltransferase Os04g0398600

probable glucuronosyltransferase Os01g0926700

Exostosin family protein

probable beta-1,4-xylosyltransferase IRX10L

probable beta-1,4-xylosyltransferase IRX10

probable beta-1,4-xylosyltransferase IRX10L

probable beta-1,4-xylosyltransferase IRX10

probable beta-1,4-xylosyltransferase IRX10L

probable beta-1,4-xylosyltransferase IRX10

probable beta-1,4-xylosyltransferase IRX10L

probable beta-1,4-xylosyltransferase IRX10

putative beta-1,4-xylosyltransferase IRX10

putative beta-1,4-xylosyltransferase IRX10L

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3
bdi00670	One carbon pool by folate	3
bdi01230	Biosynthesis of amino acids	3
bdi01240	Biosynthesis of cofactors	3
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04145	Phagosome	3
hvu04120	Ubiquitin mediated proteolysis	2
hvu00190	Oxidative phosphorylation	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04145	Phagosome	2
osa04517	IgSF CAM signaling	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	8
osa00360	Phenylalanine metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00270	Cysteine and methionine metabolism	2
osa00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	6
zma04141	Protein processing in endoplasmic reticulum	2
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	5
sbi00360	Phenylalanine metabolism	4
sbi00941	Flavonoid biosynthesis	2
sbi00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03050	Proteasome	3
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00330	Arginine and proline metabolism	3
ath00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2
bra01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	3
vvi01230	Biosynthesis of amino acids	3
vvi00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00514	Other types of O-glycan biosynthesis	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	9
sot00941	Flavonoid biosynthesis	6
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	6
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	3
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit00514	Other types of O-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	3

Expression

Expression pattern

Entrez Gene ID^*

100843114

100835653

100830089

123189102

100682498

123072084

123426591

123445303

123445304

4327240

4348204

9269523

100282889

100384778

100191546

8072543

8072039

8061104

836306

839635

100800085

100797122

100812747

101250897

101252560

101253484

103873464

103835395

103829057

100852698

100242415

7496525

7491436

25501977

25501976

107946622

107896962

107909507

106425347

106358025

106361900

102580860

102591657

102589001

102621033

102621903

107809178

107804304

107830158

The preparation time of this page was 0.2 [sec].


Species	bdi	tae	hvu	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	3	3	3	3	2	3	3	3	2	1	2	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100843114 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100843114 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**