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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100844705   phospholipase A-2-activating protein 
 osa-u.5   4342300   uncharacterized LOC4342300 
 zma-u.5   100382771   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT3G18860   transducin family protein / WD-40 repeat family protein 
 gma-u.5   100816481   phospholipase A-2-activating protein 
 gma-u.5   100805404   phospholipase A-2-activating protein 
 sly-u.5   101264260   uncharacterized LOC101264260 
 vvi-u.5   100243593   uncharacterized LOC100243593 
 ppo-u.5   112326107   uncharacterized LOC112326107 
 ppo-u.5   7469977   uncharacterized LOC7469977 
 ppo-u.5   7457495   uncharacterized LOC7457495 
 mtr-u.5   25492716   phospholipase A-2-activating protein 

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Top 50 coexpressed genes to 100844705 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100844705 (bdi-r.1 coexpression data)

CoexMap"100844705"


bdiLOC100844705 | Entrez gene ID : 100844705      
Species bdi osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit sot tae bna ghi
Paralog 1 1 1 1 2 1 1 3 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
GO BP
GO:0010992 [list] [network] ubiquitin recycling  (1 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (151 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (64 genes)  IEA  
Protein XP_003557599.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_003557599.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003557599.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100844705

.
osa-u.5
for
4342300

.
zma-u.5
for
100382771

.
ath-u.5
for
AT3G18860

.
gma-u.5
for
100816481

.
gma-u.5
for
100805404

.
sly-u.5
for
101264260

.
vvi-u.5
for
100243593

.
ppo-u.5
for
112326107

.
ppo-u.5
for
7469977

.
ppo-u.5
for
7457495

.
mtr-u.5
for
25492716

.


Ortholog ID: 7220
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT3G18860 LOC100805404 LOC100816481 LOC101264260 LOC4342300 LOC100382771 LOC103859777 LOC103869516 LOC100243593 LOC7469977 LOC7457495 LOC25492716 LOC123052907 LOC123188895 LOC123426307 LOC107898757 LOC107945161 LOC125605179 LOC106378069 CHLRE_09g389912v5 LOC8059893 LOC102594856 LOC102620389 LOC100844705 LOC107760255 LOC107765477
Function* transducin family protein / WD-40 repeat family protein phospholipase A-2-activating protein phospholipase A-2-activating protein uncharacterized LOC101264260 uncharacterized LOC4342300 transducin family protein / WD-40 repeat family protein phospholipase A-2-activating protein phospholipase A-2-activating protein uncharacterized LOC100243593 uncharacterized LOC7469977 uncharacterized LOC7457495 phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein phospholipase A-2-activating protein-like phospholipase A-2-activating protein-like uncharacterized protein phospholipase A-2-activating protein phospholipase A-2-activating protein uncharacterized LOC102620389 phospholipase A-2-activating protein uncharacterized LOC107760255 uncharacterized LOC107765477
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 14
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 4
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 5
gma04141 Protein processing in endoplasmic reticulum 3
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03083 Polycomb repressive complex 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 6
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 6
zma04141 Protein processing in endoplasmic reticulum 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03040 Spliceosome 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 4
tae04141 Protein processing in endoplasmic reticulum 4
tae04070 Phosphatidylinositol signaling system 3
tae03018 RNA degradation 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03083 Polycomb repressive complex 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03050 Proteasome 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 6
cre04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 3
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04144 Endocytosis 3
sbi03013 Nucleocytoplasmic transport 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04141 Protein processing in endoplasmic reticulum 3
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 3
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821419 100805404 100816481 101264260 4342300 100382771 103859777 103869516 100243593 7469977 7457495 25492716 123052907 123188895 123426307 107898757 107945161 125605179 106378069 5720623 8059893 102594856 102620389 100844705 107760255 107765477
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