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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846488   TATA-binding protein-associated factor 2N 
 tae-r.2   123147845   serine/arginine repetitive matrix protein 1 
 tae-r.2   123160704   serine/arginine repetitive matrix protein 1 
 tae-r.2   123166618   serine/arginine repetitive matrix protein 1 
 hvu-r.1   123413391   serine/arginine repetitive matrix protein 1 
 osa-u.5   4328998   uncharacterized LOC4328998 
 osa-u.5   4340930   uncharacterized LOC4340930 
 zma-u.5   100280706   uncharacterized LOC100280706 
 sbi-r.1   8060119   serine/arginine repetitive matrix protein 1 
 ath-u.5   AT4G28990   RNA-binding protein-like protein 
 gma-u.5   100817587   uncharacterized LOC100817587 
 gma-u.5   100799651   RNA-binding protein EWS 
 sly-u.5   101267115   uncharacterized LOC101267115 
 bra-r.6   103853943   uncharacterized LOC103853943 
 vvi-u.5   100250827   transcription initiation factor TFIID subunit 15b 
 ppo-u.5   7476292   uncharacterized LOC7476292 
 ppo-u.5   18100420   uncharacterized LOC18100420 
 mtr-u.5   11438547   uncharacterized LOC11438547 
 ghi-r.1   107939488   transcription initiation factor TFIID subunit 15 
 ghi-r.1   107932860   transcription initiation factor TFIID subunit 15 
 bna-r.1   125607223   serine/arginine repetitive matrix protein 1-like 
 bna-r.1   125610037   uncharacterized LOC125610037 
 sot-r.1   102579998   RNA-binding protein EWS 
 cit-r.1   102624215   transcription initiation factor TFIID subunit 15 
 nta-r.1   107798755   uncharacterized LOC107798755 
 nta-r.1   107811343   uncharacterized LOC107811343 

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Top 50 coexpressed genes to 100846488 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846488 (bdi-r.1 coexpression data)

CoexMap"100846488"


bdiLOC100846488 | Entrez gene ID : 100846488      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 2 1 1 1 2 1 1 1 2 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (110 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
Protein XP_003563841.1 [sequence] [blastp]
XP_010227674.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003563841.1)
nucl 9,  chlo 1,  cyto 1  (predict for XP_010227674.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003563841.1)
scret 4,  other 3  (predict for XP_010227674.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846488
tae-r.2
for
123147845
tae-r.2
for
123160704
tae-r.2
for
123166618
hvu-r.1
for
123413391
osa-u.5
for
4328998
osa-u.5
for
4340930
zma-u.5
for
100280706
sbi-r.1
for
8060119
ath-u.5
for
AT4G28990
gma-u.5
for
100817587
gma-u.5
for
100799651
sly-u.5
for
101267115
bra-r.6
for
103853943
vvi-u.5
for
100250827
ppo-u.5
for
7476292
ppo-u.5
for
18100420
mtr-u.5
for
11438547
ghi-r.1
for
107939488
ghi-r.1
for
107932860
bna-r.1
for
125607223
bna-r.1
for
125610037
sot-r.1
for
102579998
cit-r.1
for
102624215
nta-r.1
for
107798755
nta-r.1
for
107811343


Ortholog ID: 7680
Species bdi tae tae tae hvu osa osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC100846488 LOC123147845 LOC123160704 LOC123166618 LOC123413391 LOC4328998 LOC4340930 LOC100280706 LOC8060119 AT4G28990 LOC100817587 LOC100799651 LOC101267115 LOC103853943 LOC100250827 LOC7476292 LOC18100420 LOC11438547 LOC107939488 LOC107932860 LOC125607223 LOC125610037 LOC106407436 LOC102579998 LOC102624215 LOC107798755 LOC107811343
Function* TATA-binding protein-associated factor 2N serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 serine/arginine repetitive matrix protein 1 uncharacterized LOC4328998 uncharacterized LOC4340930 uncharacterized LOC100280706 serine/arginine repetitive matrix protein 1 RNA-binding protein-like protein uncharacterized LOC100817587 RNA-binding protein EWS uncharacterized LOC101267115 uncharacterized LOC103853943 transcription initiation factor TFIID subunit 15b uncharacterized LOC7476292 uncharacterized LOC18100420 uncharacterized LOC11438547 transcription initiation factor TFIID subunit 15 transcription initiation factor TFIID subunit 15 serine/arginine repetitive matrix protein 1-like uncharacterized LOC125610037 pollen-specific leucine-rich repeat extensin-like protein 3 RNA-binding protein EWS transcription initiation factor TFIID subunit 15 uncharacterized LOC107798755 uncharacterized LOC107811343
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03013 Nucleocytoplasmic transport 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
bna03018 RNA degradation 4
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846488 123147845 123160704 123166618 123413391 4328998 4340930 100280706 8060119 829020 100817587 100799651 101267115 103853943 100250827 7476292 18100420 11438547 107939488 107932860 125607223 125610037 106407436 102579998 102624215 107798755 107811343
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