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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846621   probable rhamnogalacturonate lyase B 
 bdi-r.1   100833182   probable rhamnogalacturonate lyase B 
 tae-r.2   123149816   probable rhamnogalacturonate lyase B 
 hvu-r.1   123407127   probable rhamnogalacturonate lyase B 
 osa-u.5   4346275   uncharacterized LOC4346275 
 osa-u.5   4346274   uncharacterized LOC4346274 
 osa-u.5   4349697   uncharacterized LOC4349697 
 zma-u.5   100286025   lyase 
 zma-u.5   103654318   rhamnogalacturonate lyase B 
 zma-u.5   103643208   probable rhamnogalacturonate lyase B 
 sbi-r.1   8057831   probable rhamnogalacturonate lyase B 
 ath-u.5   AT2G22620   Rhamnogalacturonate lyase family protein 
 gma-u.5   100815677   probable rhamnogalacturonate lyase B 
 gma-u.5   100814721   probable rhamnogalacturonate lyase B 
 gma-u.5   100786488   probable rhamnogalacturonate lyase B 
 sly-u.5   101261914   uncharacterized LOC101261914 
 sly-u.5   101248195   uncharacterized LOC101248195 
 sly-u.5   101248481   uncharacterized LOC101248481 
 bra-r.6   103864654   rhamnogalacturonate lyase 
 bra-r.6   103837873   probable rhamnogalacturonate lyase B 
 bra-r.6   103871769   rhamnogalacturonate lyase B 
 vvi-u.5   100247189   probable rhamnogalacturonate lyase B 
 ppo-u.5   7464763   probable rhamnogalacturonate lyase B 
 ppo-u.5   7491976   rhamnogalacturonate lyase B 
 ppo-u.5   7467217   probable rhamnogalacturonate lyase B 
 mtr-u.5   11422528   probable rhamnogalacturonate lyase B 
 mtr-u.5   11444270   rhamnogalacturonate lyase 
 mtr-u.5   11405460   rhamnogalacturonate lyase B 
 ghi-r.1   107902599   probable rhamnogalacturonate lyase B 
 ghi-r.1   107957840   rhamnogalacturonate lyase 
 bna-r.1   106346230   rhamnogalacturonate lyase B-like 
 bna-r.1   106346233   probable rhamnogalacturonate lyase B 
 bna-r.1   106441989   rhamnogalacturonate lyase 
 sot-r.1   102605219   probable rhamnogalacturonate lyase B 
 cit-r.1   102621817   probable rhamnogalacturonate lyase B 
 nta-r.1   107822331   uncharacterized LOC107822331 
 nta-r.1   107806431   uncharacterized LOC107806431 
 nta-r.1   107815910   uncharacterized LOC107815910 

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Top 50 coexpressed genes to 100846621 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846621 (bdi-r.1 coexpression data)

CoexMap"100846621"


bdiLOC100846621 | Entrez gene ID : 100846621      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 1 1 3 3 1 1 3 3 3 1 3 3 2 3 1 1 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0030246 [list] [network] carbohydrate binding  (231 genes)  IEA  
Protein XP_010236050.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  E.R. 3,  cyto_nucl 3,  mito 1,  E.R._vacu 1  (predict for XP_010236050.1)
Subcellular
localization
TargetP
mito 8,  other 6  (predict for XP_010236050.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846621
bdi-r.1
for
100833182
tae-r.2
for
123149816
hvu-r.1
for
123407127
osa-u.5
for
4346275
osa-u.5
for
4346274
osa-u.5
for
4349697
zma-u.5
for
100286025
zma-u.5
for
103654318
zma-u.5
for
103643208
sbi-r.1
for
8057831
ath-u.5
for
AT2G22620
gma-u.5
for
100815677
gma-u.5
for
100814721
gma-u.5
for
100786488
sly-u.5
for
101261914
sly-u.5
for
101248195
sly-u.5
for
101248481
bra-r.6
for
103864654
bra-r.6
for
103837873
bra-r.6
for
103871769
vvi-u.5
for
100247189
ppo-u.5
for
7464763
ppo-u.5
for
7491976
ppo-u.5
for
7467217
mtr-u.5
for
11422528
mtr-u.5
for
11444270
mtr-u.5
for
11405460
ghi-r.1
for
107902599
ghi-r.1
for
107957840
bna-r.1
for
106346230
bna-r.1
for
106346233
bna-r.1
for
106441989
sot-r.1
for
102605219
cit-r.1
for
102621817
nta-r.1
for
107822331
nta-r.1
for
107806431
nta-r.1
for
107815910


Ortholog ID: 639
Species bdi bdi hvu osa osa osa zma zma zma ath gma gma gma sly sly sly bra bra bra vvi ppo ppo ppo mtr mtr mtr ghi ghi bna bna bna sot sot sot cit nta nta nta
Symbol LOC100846621 LOC100833182 LOC123407127 LOC4346275 LOC4346274 LOC4349697 LOC100286025 LOC103654318 LOC103643208 AT1G09910 LOC100815677 LOC100786488 LOC100814185 LOC101261914 LOC101250582 LOC101260634 LOC103864654 LOC103871769 LOC103871768 LOC100247189 LOC7464763 LOC7491976 LOC7467217 LOC11422528 LOC11444270 LOC11426848 LOC107957840 LOC107905134 LOC106441989 LOC106415698 LOC106391090 LOC102595358 LOC102584605 LOC102588214 LOC102631222 LOC107831685 LOC107814403 LOC107816999
Function* probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B uncharacterized LOC4346275 uncharacterized LOC4346274 uncharacterized LOC4349697 lyase rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B Rhamnogalacturonate lyase family protein probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase uncharacterized LOC101261914 uncharacterized LOC101250582 uncharacterized LOC101260634 rhamnogalacturonate lyase rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase rhamnogalacturonate lyase probable rhamnogalacturonate lyase B rhamnogalacturonate lyase probable rhamnogalacturonate lyase B rhamnogalacturonate lyase-like rhamnogalacturonate lyase-like probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B uncharacterized LOC107831685 uncharacterized LOC107814403 uncharacterized LOC107816999
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma02010 ABC transporters 2
zma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 2
bra01212 Fatty acid metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03430 Mismatch repair 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 3
sot00071 Fatty acid degradation 3
sot01212 Fatty acid metabolism 3
sot04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846621 100833182 123407127 4346275 4346274 4349697 100286025 103654318 103643208 837523 100815677 100786488 100814185 101261914 101250582 101260634 103864654 103871769 103871768 100247189 7464763 7491976 7467217 11422528 11444270 11426848 107957840 107905134 106441989 106415698 106391090 102595358 102584605 102588214 102631222 107831685 107814403 107816999
The preparation time of this page was 3.8 [sec].