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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100846939   OTU domain-containing protein At3g57810 
 tae-r.2   123113744   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 tae-r.2   123062832   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 tae-r.2   123071679   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 hvu-r.1   123445037   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like 
 hvu-r.1   123399376   uncharacterized LOC123399376 
 osa-u.5   4347429   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 osa-u.5   4345979   uncharacterized LOC4345979 
 osa-u.5   4325039   uncharacterized LOC4325039 
 zma-u.5   100284472   uncharacterized LOC100284472 
 zma-u.5   100275661   uncharacterized LOC100275661 
 zma-u.5   100193463   uncharacterized LOC100193463 
 sbi-r.1   8055183   OTU domain-containing protein At3g57810 
 sbi-r.1   8055871   OTU domain-containing protein At3g57810 
 ath-u.5   AT3G57810   Cysteine proteinases superfamily protein 
 gma-u.5   100792132   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 gma-u.5   100793001   uncharacterized LOC100793001 
 gma-u.5   100796040   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 sly-u.5   101253339   uncharacterized LOC101253339 
 bra-r.6   103841684   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 vvi-u.5   100251219   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 vvi-u.5   100245448   uncharacterized LOC100245448 
 vvi-u.5   100853500   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 ppo-u.5   7479833   uncharacterized LOC7479833 
 ppo-u.5   7468472   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 mtr-u.5   11429086   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 mtr-u.5   25485810   deubiquitinase OTUD6B 
 ghi-r.1   107889527   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 ghi-r.1   121222508   uncharacterized LOC121222508 
 ghi-r.1   121219873   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 bna-r.1   106376867   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 bna-r.1   111200346   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like 
 sot-r.1   102606023   uncharacterized LOC102606023 
 cit-r.1   102607992   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 cit-r.1   102630016   uncharacterized LOC102630016 
 cit-r.1   102623357   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like 
 nta-r.1   107831574   uncharacterized LOC107831574 
 nta-r.1   107820843   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 nta-r.1   107821917   OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 
 cre-r.1   CHLRE_01g047450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100846939 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100846939 (bdi-r.1 coexpression data)

CoexMap"100846939"


bdiLOC100846939 | Entrez gene ID : 100846939      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 2 3 3 2 1 3 1 1 3 2 2 3 2 1 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030968 [list] [network] endoplasmic reticulum unfolded protein response  (18 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (86 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (72 genes)  IEA  
Protein XP_003574746.1 [sequence] [blastp]
XP_010235293.1 [sequence] [blastp]
XP_024316419.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4  (predict for XP_003574746.1)
mito 5,  chlo 4  (predict for XP_010235293.1)
chlo 5,  mito 4  (predict for XP_024316419.1)
Subcellular
localization
TargetP
chlo 7,  mito 6  (predict for XP_003574746.1)
chlo 7,  mito 6  (predict for XP_010235293.1)
chlo 7,  mito 6  (predict for XP_024316419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100846939
tae-r.2
for
123113744
tae-r.2
for
123062832
tae-r.2
for
123071679
hvu-r.1
for
123445037
hvu-r.1
for
123399376
osa-u.5
for
4347429
osa-u.5
for
4345979
osa-u.5
for
4325039
zma-u.5
for
100284472
zma-u.5
for
100275661
zma-u.5
for
100193463
sbi-r.1
for
8055183
sbi-r.1
for
8055871
ath-u.5
for
AT3G57810
gma-u.5
for
100792132
gma-u.5
for
100793001
gma-u.5
for
100796040
sly-u.5
for
101253339
bra-r.6
for
103841684
vvi-u.5
for
100251219
vvi-u.5
for
100245448
vvi-u.5
for
100853500
ppo-u.5
for
7479833
ppo-u.5
for
7468472
mtr-u.5
for
11429086
mtr-u.5
for
25485810
ghi-r.1
for
107889527
ghi-r.1
for
121222508
ghi-r.1
for
121219873
bna-r.1
for
106376867
bna-r.1
for
111200346
sot-r.1
for
102606023
cit-r.1
for
102607992
cit-r.1
for
102630016
cit-r.1
for
102623357
nta-r.1
for
107831574
nta-r.1
for
107820843
nta-r.1
for
107821917
cre-r.1
for
CHLRE_01g047450v5


Ortholog ID: 2282
Species bdi tae tae hvu hvu osa osa osa zma zma zma sbi sbi ath gma gma gma sly bra vvi vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna sot cit cit cit nta nta nta cre
Symbol LOC100846939 LOC123113744 LOC123121920 LOC123445037 LOC123452776 LOC4347429 LOC4345979 LOC4325039 LOC100284472 LOC100275661 LOC100193463 LOC8055183 LOC8055871 AT3G57810 LOC100792132 LOC100796040 LOC100810338 LOC101253339 LOC103841684 LOC100251219 LOC100245448 LOC100853500 LOC7479833 LOC7483998 LOC11429086 LOC25483392 LOC121219873 LOC107891276 LOC107896321 LOC106376867 LOC111200346 LOC102606023 LOC102607992 LOC102630016 LOC102623357 LOC107831574 LOC107820843 LOC107760731 CHLRE_01g047450v5
Function* OTU domain-containing protein At3g57810 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC4345979 uncharacterized LOC4325039 uncharacterized LOC100284472 uncharacterized LOC100275661 uncharacterized LOC100193463 OTU domain-containing protein At3g57810 OTU domain-containing protein At3g57810 Cysteine proteinases superfamily protein OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OTU domain-containing protein At3g57810-like uncharacterized LOC101253339 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC100245448 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC7479833 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like uncharacterized LOC102606023 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 uncharacterized LOC102630016 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4-like uncharacterized LOC107831574 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi01200 Carbon metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 6
osa01230 Biosynthesis of amino acids 5
osa00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 5
osa03040 Spliceosome 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03040 Spliceosome 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath04141 Protein processing in endoplasmic reticulum 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00020 Citrate cycle (TCA cycle) 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma01200 Carbon metabolism 2
gma01210 2-Oxocarboxylic acid metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo00620 Pyruvate metabolism 2
ppo01200 Carbon metabolism 2
ppo00061 Fatty acid biosynthesis 2
ppo01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna00970 Aminoacyl-tRNA biosynthesis 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04070 Phosphatidylinositol signaling system 4
bna04075 Plant hormone signal transduction 4
bna04626 Plant-pathogen interaction 4
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit01240 Biosynthesis of cofactors 3
cit00020 Citrate cycle (TCA cycle) 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 3
nta00561 Glycerolipid metabolism 3
nta00600 Sphingolipid metabolism 3
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100846939 123113744 123121920 123445037 123452776 4347429 4345979 4325039 100284472 100275661 100193463 8055183 8055871 824950 100792132 100796040 100810338 101253339 103841684 100251219 100245448 100853500 7479833 7483998 11429086 25483392 121219873 107891276 107896321 106376867 111200346 102606023 102607992 102630016 102623357 107831574 107820843 107760731 5715684
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