ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100857032	Cold shock protein 2
zma-r.6	100857032	Cold shock protein 2
zma-m.5	100857032	Cold shock protein 2
zma-u.5	100285240	uncharacterized LOC100285240
osa-u.5	4328119	glycine-rich protein 2
osa-u.5	4344581	glycine-rich protein 2
ath-u.5	GRP2B	glycine-rich protein 2B
ath-u.5	GRP2	glycine rich protein 2
gma-u.5	100813178	cold shock protein 2
gma-u.5	100815773	glycine-rich protein 2
gma-u.5	100815731	glycine-rich protein 2
sly-u.5	101259590	glycine-rich protein 2
sly-u.5	101249407	glycine-rich protein 2-like
vvi-u.5	100259081	glycine-rich protein 2
vvi-u.5	100259004	glycine-rich protein 2
vvi-u.5	100266087	cold shock protein 2
ppo-u.5	7470385	glycine-rich protein 2
ppo-u.5	7463174	glycine-rich protein 2
ppo-u.5	7469135	glycine-rich protein 2
mtr-u.5	112417509	cold shock domain-containing protein 3

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(807 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(4170 genes)	IEA

Protein

NP_001334871.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, extr 1

(predict for NP_001334871.1)

Subcellular
localization
TargetP

other 6, mito 6

(predict for NP_001334871.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100857032	zma-r.6 for 100857032	zma-m.5 for 100857032	zma-u.5 for 100285240	osa-u.5 for 4328119	osa-u.5 for 4344581	ath-u.5 for GRP2B	ath-u.5 for GRP2	gma-u.5 for 100813178	gma-u.5 for 100815773	gma-u.5 for 100815731	sly-u.5 for 101259590	sly-u.5 for 101249407	vvi-u.5 for 100259081	vvi-u.5 for 100259004	vvi-u.5 for 100266087	ppo-u.5 for 7470385	ppo-u.5 for 7463174	ppo-u.5 for 7469135	mtr-u.5 for 112417509

Ortholog

Ortholog ID: 1335

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

GRP2B

GRP2

Function^*

uncharacterized LOC100285240

Cold shock protein 2

glycine-rich protein 2

cold shock-like protein CspC

glycine-rich protein 2

glycine-rich protein 2B

glycine rich protein 2

cold shock domain-containing protein 3

glycine-rich protein 2

glycine-rich protein 2-like

glycine-rich protein 2

cold shock protein 2

glycine-rich protein 2

cold shock protein 2

glycine-rich protein 2

cold shock domain-containing protein 3

glycine-rich protein 2

cold shock protein 2

cold shock domain-containing protein 4-like

glycine-rich protein 2-like

glycine-rich protein 2

cold shock protein 2

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	6
zma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3
zma03040	Spliceosome	3
zma00100	Steroid biosynthesis	2
zma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	3
sbi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi00030	Pentose phosphate pathway	2
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	2
osa03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	5
osa00190	Oxidative phosphorylation	5
osa03013	Nucleocytoplasmic transport	2
osa03015	mRNA surveillance pathway	2
osa03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03015	mRNA surveillance pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03010	Ribosome	2
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	11
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00052	Galactose metabolism	2
ppo00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	19
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	5
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	7
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00196	Photosynthesis - antenna proteins	7
cre00195	Photosynthesis	5

Expression

Expression pattern

Entrez Gene ID^*

100285240

100857032

8066848

8068258

4344581

4328119

542791

123425052

100828678

816641

830024

106796585

100815731

101259298

101259590

103842561

103835399

100259081

100266087

7463174

7470385

112417509

107927849

107908662

106358021

125607971

102596882

102590251

102616860

102613691

107832840

107810166

5721889

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100857032 (zma-u.5 coexpression data)

Top 50 enrichment test to 100857032 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	2	2	3	2	3	3	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100857032 (zma-u.5 coexpression data)

Top 50 enrichment test to 100857032 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**