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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101243672   DNA repair protein RAD5B 
 sly-r.6   101243672   DNA repair protein RAD5B 
 gma-u.5   100806677   DNA repair protein RAD5B 
 vvi-u.5   100264745   DNA repair protein RAD5B 
 ppo-u.5   18096892   DNA repair protein RAD5B 
 mtr-u.5   25483011   DNA repair protein RAD5B 
 osa-u.5   4335086   DNA repair protein RAD5B 
 zma-u.5   100383801   Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 

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Top 50 coexpressed genes to 101243672 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101243672 (sly-u.5 coexpression data)

CoexMap"101243672"


slyLOC101243672 | Entrez gene ID : 101243672    
Species sly gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae ath nta bna
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006281 [list] [network] DNA repair  (281 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (54 genes)  IEA  
GO:0016818 [list] [network] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides  (684 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (4457 genes)  IEA  
Protein XP_004234234.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for XP_004234234.3)
Subcellular
localization
TargetP
other 7  (predict for XP_004234234.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101243672

.
sly-r.6
for
101243672

.
gma-u.5
for
100806677

.
vvi-u.5
for
100264745

.
ppo-u.5
for
18096892

.
mtr-u.5
for
25483011

.
osa-u.5
for
4335086

.
zma-u.5
for
100383801

.


Ortholog ID: 11749
Species gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol LOC100806677 LOC101243672 LOC4335086 LOC100383801 LOC100264745 LOC18096892 LOC25483011 LOC123051313 LOC123187267 LOC123424485 LOC107928456 LOC107929021 LOC111207443 LOC111213781 LOC8085740 LOC102588387 LOC100835802 LOC107785868 LOC107765948
Function* DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B-like DNA repair protein RAD5B DNA repair protein RAD5B DNA repair protein RAD5B-like DNA repair protein RAD5B putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 DNA repair protein RAD5B DNA repair protein RAD5B-like DNA repair protein RAD5B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 5
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 3
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03440 Homologous recombination 4
tae03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03420 Nucleotide excision repair 4
tae03430 Mismatch repair 4
tae03018 RNA degradation 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 9
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 9
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
sbi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 5
sot03440 Homologous recombination 3
sot03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100806677 101243672 4335086 100383801 100264745 18096892 25483011 123051313 123187267 123424485 107928456 107929021 111207443 111213781 8085740 102588387 100835802 107785868 107765948
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