ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101243830	germin-like protein 5-1
sly-r.6	101243830	germin-like protein 5-1
sly-u.5	Mdip1	germin-like protein
sly-u.5	101264308	germin-like protein subfamily T member 2
sly-u.5	101263991	germin-like protein subfamily T member 2
sot-r.1	102600664	germin-like protein subfamily T member 2
sot-r.1	102602644	nectarin-1-like
nta-r.1	142161635	nectarin-1-like
nta-r.1	107780885	nectarin-1
nta-r.1	142161802	nectarin-1-like
ath-u.5	GLP10	germin-like protein 10
ath-u.5	AT5G26700	RmlC-like cupins superfamily protein
gma-u.5	100791628	germin-like protein
gma-u.5	GER17	germin-like protein 17
gma-u.5	GER19	germin-like protein
bra-r.6	103844597	germin-like protein subfamily 2 member 2
bra-r.6	103842671	germin-like protein subfamily T member 2
bra-r.6	103843347	germin-like protein subfamily 2 member 1
vvi-u.5	100262082	germin-like protein subfamily T member 2
vvi-u.5	100267594	germin-like protein subfamily 2 member 4
ppo-u.5	18098473	germin-like protein 5-1
ppo-u.5	7474856	germin-like protein subfamily T member 2
ppo-u.5	7478825	germin-like protein subfamily 2 member 4
mtr-u.5	11433103	rhicadhesin receptor
mtr-u.5	25484721	germin-like protein subfamily 2 member 4
mtr-u.5	11405949	rhicadhesin receptor
ghi-r.1	107930459	germin-like protein subfamily 2 member 4
ghi-r.1	107923008	germin-like protein subfamily 2 member 4
bna-r.1	106368498	germin-like protein subfamily 2 member 4
bna-r.1	125591686	germin-like protein subfamily 2 member 1
bna-r.1	106365876	probable germin-like protein subfamily 2 member 5
cit-r.1	102617347	germin-like protein subfamily 2 member 4
cit-r.1	102611719	germin-like protein subfamily T member 2
cit-r.1	102616796	rhicadhesin receptor
osa-u.5	4327219	germin-like protein 5-1
osa-u.5	4327911	germin-like protein 1-1
zma-u.5	100284680	rhicadhesin receptor
zma-u.5	100273935	rhicadhesin receptor
zma-u.5	110566978	uncharacterized LOC110566978
tae-r.2	123087718	germin-like protein 5-1
hvu-r.1	123403868	germin-like protein 1-1
hvu-r.1	123399032	germin-like protein 3-7
hvu-r.1	123402531	germin-like protein 1-1
sbi-r.1	8077363	putative germin-like protein 3-2
sbi-r.1	8077362	germin-like protein 1-3
sbi-r.1	8056583	germin-like protein 5-1
bdi-r.1	100844154	germin-like protein 3-7
bdi-r.1	100846595	germin-like protein 5-1
bdi-r.1	100835200	putative germin-like protein 3-2

Top 50 coexpressed genes to 101243830 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101243830 (sly-u.5 coexpression data)

CoexMap"101243830"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:2000280 [list] [network] regulation of root development	(3 genes)	IEA
GO:0010497 [list] [network] plasmodesmata-mediated intercellular transport	(7 genes)	IEA

GO CC

GO:0009506 [list] [network] plasmodesma	(150 genes)	IEA
GO:0005618 [list] [network] cell wall	(167 genes)	IEA

GO MF

GO:0030145 [list] [network] manganese ion binding

(35 genes)

IEA

Protein

XP_004230374.3 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, cyto_plas 3, E.R. 2, chlo 1, mito 1, extr 1, chlo_mito 1

(predict for XP_004230374.3)

Subcellular
localization
TargetP

mito 7, other 5

(predict for XP_004230374.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101243830	sly-r.6 for 101243830	sly-u.5 for Mdip1	sly-u.5 for 101264308	sly-u.5 for 101263991	sot-r.1 for 102600664	sot-r.1 for 102602644	nta-r.1 for 142161635	nta-r.1 for 107780885	nta-r.1 for 142161802	ath-u.5 for GLP10	ath-u.5 for AT5G26700	gma-u.5 for 100791628	gma-u.5 for GER17	gma-u.5 for GER19	bra-r.6 for 103844597	bra-r.6 for 103842671	bra-r.6 for 103843347	vvi-u.5 for 100262082	vvi-u.5 for 100267594	ppo-u.5 for 18098473	ppo-u.5 for 7474856	ppo-u.5 for 7478825	mtr-u.5 for 11433103	mtr-u.5 for 25484721	mtr-u.5 for 11405949	ghi-r.1 for 107930459	ghi-r.1 for 107923008	bna-r.1 for 106368498	bna-r.1 for 125591686	bna-r.1 for 106365876	cit-r.1 for 102617347	cit-r.1 for 102611719	cit-r.1 for 102616796	osa-u.5 for 4327219	osa-u.5 for 4327911	zma-u.5 for 100284680	zma-u.5 for 100273935	zma-u.5 for 110566978	tae-r.2 for 123087718	hvu-r.1 for 123403868	hvu-r.1 for 123399032	hvu-r.1 for 123402531	sbi-r.1 for 8077363	sbi-r.1 for 8077362	sbi-r.1 for 8056583	bdi-r.1 for 100844154	bdi-r.1 for 100846595	bdi-r.1 for 100835200

Ortholog

Ortholog ID: 322

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Mdip1

GLP10

GER19

GER16

Function^*

germin-like protein

germin-like protein subfamily T member 2

nectarin-1-like

nectarin-1

nectarin-1-like

germin-like protein 10

germin-like protein

germin-like protein subfamily T member 2

germin-like protein subfamily 2 member 1