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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101243905  peroxiredoxin Q, chloroplastic 
 sly-r.6  101243905  peroxiredoxin Q, chloroplastic 
 sot-r.1  102589036  peroxiredoxin Q, chloroplastic 
 nta-r.1  107805800  peroxiredoxin Q, chloroplastic-like 
 nta-r.1  107778186  peroxiredoxin Q, chloroplastic 
 nta-r.1  107777133  peroxiredoxin Q, chloroplastic 
 ath-u.5  PRXQ  Thioredoxin superfamily protein 
 gma-u.5  100500610  thioredoxin superfamily protein 
 gma-u.5  100306216  thioredoxin superfamily protein 
 bra-r.6  103854405  peroxiredoxin Q, chloroplastic 
 vvi-u.5  100250698  peroxiredoxin Q 
 ppo-u.5  7455648  peroxiredoxin Q, chloroplastic 
 ppo-u.5  7490532  peroxiredoxin Q, chloroplastic 
 mtr-u.5  11441719  peroxiredoxin Q, chloroplastic 
 ghi-r.1  121204781  peroxiredoxin Q, chloroplastic 
 ghi-r.1  107932808  peroxiredoxin Q, chloroplastic 
 bna-r.1  125575770  peroxiredoxin Q, chloroplastic-like 
 bna-r.1  106436659  peroxiredoxin Q, chloroplastic 
 bna-r.1  125598456  peroxiredoxin Q, chloroplastic-like 
 cit-r.1  102620446  peroxiredoxin Q, chloroplastic 
 osa-u.5  4340391  putative peroxiredoxin Q, chloroplastic 
 zma-u.5  100283690  peroxiredoxin bcp 
 sbi-r.1  8077303  peroxiredoxin Q, chloroplastic 
 cre-r.1  CHLRE_02g114600v5  uncharacterized protein 
 cre-r.1  CHLRE_02g095069v5  uncharacterized protein 
 cre-r.1  CHLRE_10g422300v5  uncharacterized protein 

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Top 50 coexpressed genes to 101243905 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101243905 (sly-u.5 coexpression data)

CoexMap"101243905"


slyLOC101243905 | Entrez gene ID : 101243905
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma sbi cre hvu tae bdi
Paralog 2 1 3 1 2 1 1 2 1 2 3 1 1 1 1 3 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045454 [list] [network] cell redox homeostasis  (23 genes)  IEA  
GO:0034599 [list] [network] cellular response to oxidative stress  (33 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (117 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0008379 [list] [network] thioredoxin peroxidase activity  (6 genes)  IEA  
Protein NP_001296952.1 [sequence] [blastp]
NP_001296953.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001296952.1)
chlo 10  (predict for NP_001296953.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001296952.1)
chlo 8  (predict for NP_001296953.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101243905


sly-r.6
for
101243905


sot-r.1
for
102589036


nta-r.1
for
107805800


nta-r.1
for
107778186


nta-r.1
for
107777133


ath-u.5
for
PRXQ


gma-u.5
for
100500610


gma-u.5
for
100306216


bra-r.6
for
103854405


vvi-u.5
for
100250698


ppo-u.5
for
7455648


ppo-u.5
for
7490532


mtr-u.5
for
11441719


ghi-r.1
for
121204781


ghi-r.1
for
107932808


bna-r.1
for
125575770


bna-r.1
for
106436659


bna-r.1
for
125598456


cit-r.1
for
102620446


osa-u.5
for
4340391


zma-u.5
for
100283690


sbi-r.1
for
8077303


cre-r.1
for
CHLRE_02g114600v5


cre-r.1
for
CHLRE_02g095069v5


cre-r.1
for
CHLRE_10g422300v5



Ortholog ID: 8484
Species sly sot nta nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna bna cit osa zma sbi cre cre cre
Symbol LOC101243905 LOC102589036 LOC107805800 LOC107777133 LOC107805477 PRXQ LOC100500610 LOC100306216 LOC103854405 LOC100250698 LOC7455648 LOC7490532 LOC11441719 LOC121204781 LOC107932808 LOC125575770 LOC106436659 LOC125598456 LOC102620446 LOC4340391 LOC100283690 LOC8077303 CHLRE_02g114600v5 CHLRE_02g095069v5 CHLRE_10g422300v5
Function* peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic-like peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic Thioredoxin superfamily protein thioredoxin superfamily protein thioredoxin superfamily protein peroxiredoxin Q, chloroplastic peroxiredoxin Q peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic-like peroxiredoxin Q, chloroplastic peroxiredoxin Q, chloroplastic-like peroxiredoxin Q, chloroplastic putative peroxiredoxin Q, chloroplastic peroxiredoxin bcp peroxiredoxin Q, chloroplastic uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 8
sot00630 Glyoxylate and dicarboxylate metabolism 3
sot01200 Carbon metabolism 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00620 Pyruvate metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00860 Porphyrin metabolism 2
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 5
nta01240 Biosynthesis of cofactors 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
vvi00196 Photosynthesis - antenna proteins 6
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 5
ppo00196 Photosynthesis - antenna proteins 3
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 8
cre01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101243905 102589036 107805800 107777133 107805477 822203 100500610 100306216 103854405 100250698 7455648 7490532 11441719 121204781 107932808 125575770 106436659 125598456 102620446 4340391 100283690 8077303 5725212 5727714 5728248
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