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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101243918   crotonase/enoyl-coenzyme A (CoA) hydratase superfamily 
 sly-r.6   101243918   crotonase/enoyl-coenzyme A (CoA) hydratase superfamily 
 sot-r.1   102597786   putative enoyl-CoA hydratase/isomerase YngF 
 nta-r.1   107760662   putative enoyl-CoA hydratase 2, mitochondrial 
 nta-r.1   107816158   putative enoyl-CoA hydratase 2, mitochondrial 
 ath-u.5   AT4G16800   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 gma-u.5   100526933   crotonase/enoyl-coenzyme A hydratase superfamily 
 gma-u.5   100306241   probable enoyl-CoA hydratase 2, mitochondrial 
 bra-r.6   103833979   probable enoyl-CoA hydratase 2, mitochondrial 
 vvi-u.5   100259474   probable enoyl-CoA hydratase 2, mitochondrial 
 ppo-u.5   18094577   probable enoyl-CoA hydratase 2, mitochondrial 
 ppo-u.5   18096880   probable enoyl-CoA hydratase 2, mitochondrial 
 mtr-u.5   11406894   probable enoyl-CoA hydratase 2, mitochondrial 
 ghi-r.1   121224309   probable enoyl-CoA hydratase 2, mitochondrial 
 ghi-r.1   107939885   probable enoyl-CoA hydratase 2, mitochondrial 
 bna-r.1   106411580   probable enoyl-CoA hydratase 2, mitochondrial 
 bna-r.1   125575133   probable enoyl-CoA hydratase 2, mitochondrial 
 cit-r.1   102616294   probable enoyl-CoA hydratase 2, mitochondrial 
 osa-u.5   4330183   probable enoyl-CoA hydratase 2, mitochondrial 
 osa-u.5   4330184   probable enoyl-CoA hydratase 2, mitochondrial 
 zma-u.5   100284299   methylglutaconyl-CoA hydratase 
 zma-u.5   100193367   uncharacterized LOC100193367 
 tae-r.2   123137747   probable enoyl-CoA hydratase 2, mitochondrial 
 tae-r.2   123127887   probable enoyl-CoA hydratase 2, mitochondrial 
 tae-r.2   123144980   probable enoyl-CoA hydratase 2, mitochondrial 
 hvu-r.1   123401641   probable enoyl-CoA hydratase 2, mitochondrial 
 sbi-r.1   8073970   probable enoyl-CoA hydratase 2, mitochondrial 
 sbi-r.1   8073969   probable enoyl-CoA hydratase 2, mitochondrial 
 bdi-r.1   100843164   probable enoyl-CoA hydratase 2, mitochondrial 
 cre-r.1   CHLRE_03g190850v5   uncharacterized protein 
 cre-r.1   CHLRE_02g091850v5   uncharacterized protein 

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Top 50 coexpressed genes to 101243918 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101243918 (sly-u.5 coexpression data)

CoexMap"101243918"


slyLOC101243918 | Entrez gene ID : 101243918    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 2 1 2 2 1 2 2 3 1 2 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00280 [list] [network] Valine, leucine and isoleucine degradation (67 genes)
GO BP
GO:0006635 [list] [network] fatty acid beta-oxidation  (29 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO MF
GO:0003824 [list] [network] catalytic activity  (8519 genes)  IEA  
Protein NP_001311429.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for NP_001311429.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001311429.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101243918
sly-r.6
for
101243918
sot-r.1
for
102597786
nta-r.1
for
107760662
nta-r.1
for
107816158
ath-u.5
for
AT4G16800
gma-u.5
for
100526933
gma-u.5
for
100306241
bra-r.6
for
103833979
vvi-u.5
for
100259474
ppo-u.5
for
18094577
ppo-u.5
for
18096880
mtr-u.5
for
11406894
ghi-r.1
for
121224309
ghi-r.1
for
107939885
bna-r.1
for
106411580
bna-r.1
for
125575133
cit-r.1
for
102616294
osa-u.5
for
4330183
osa-u.5
for
4330184
zma-u.5
for
100284299
zma-u.5
for
100193367
tae-r.2
for
123137747
tae-r.2
for
123127887
tae-r.2
for
123144980
hvu-r.1
for
123401641
sbi-r.1
for
8073970
sbi-r.1
for
8073969
bdi-r.1
for
100843164
cre-r.1
for
CHLRE_03g190850v5
cre-r.1
for
CHLRE_02g091850v5


Ortholog ID: 6608
Species sly sot nta nta ath gma gma bra vvi ppo ppo mtr ghi ghi bna bna cit osa osa zma zma tae tae tae hvu sbi sbi bdi cre cre
Symbol LOC101243918 LOC102597786 LOC107760662 LOC107816158 AT4G16800 LOC100526933 LOC100306241 LOC103833979 LOC100259474 LOC18094577 LOC18096880 LOC11406894 LOC121224309 LOC107939885 LOC106411580 LOC125575133 LOC102616294 LOC4330183 LOC4330184 LOC100284299 LOC100193367 LOC123127887 LOC123144980 LOC123144979 LOC123401641 LOC8073970 LOC8073969 LOC100843164 CHLRE_03g190850v5 CHLRE_02g091850v5
Function* crotonase/enoyl-coenzyme A (CoA) hydratase superfamily putative enoyl-CoA hydratase/isomerase YngF putative enoyl-CoA hydratase 2, mitochondrial putative enoyl-CoA hydratase 2, mitochondrial ATP-dependent caseinolytic (Clp) protease/crotonase family protein crotonase/enoyl-coenzyme A hydratase superfamily probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial methylglutaconyl-CoA hydratase uncharacterized LOC100193367 probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial probable enoyl-CoA hydratase 2, mitochondrial uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 4
sly04016 MAPK signaling pathway - plant 2
sly00650 Butanoate metabolism 2
sly01200 Carbon metabolism 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 8
sot01200 Carbon metabolism 4
sot00310 Lysine degradation 3
sot00410 beta-Alanine metabolism 3
sot00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00620 Pyruvate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta00071 Fatty acid degradation 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath00561 Glycerolipid metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma00270 Cysteine and methionine metabolism 2
gma00380 Tryptophan metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma00270 Cysteine and methionine metabolism 2
gma00380 Tryptophan metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 3
ppo03015 mRNA surveillance pathway 2
ppo04382 Cornified envelope formation 2
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ghi01230 Biosynthesis of amino acids 4
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ghi01230 Biosynthesis of amino acids 4
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 5
bna00592 alpha-Linolenic acid metabolism 5
bna01212 Fatty acid metabolism 5
bna00240 Pyrimidine metabolism 3
bna00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00071 Fatty acid degradation 4
bna00592 alpha-Linolenic acid metabolism 4
bna01212 Fatty acid metabolism 4
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
cit03030 DNA replication 2
cit03410 Base excision repair 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 10
osa01210 2-Oxocarboxylic acid metabolism 4
osa00650 Butanoate metabolism 3
osa01200 Carbon metabolism 3
osa00640 Propanoate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 4
zma01200 Carbon metabolism 4
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00071 Fatty acid degradation 2
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma00511 Other glycan degradation 2
zma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 9
tae00310 Lysine degradation 6
tae00260 Glycine, serine and threonine metabolism 5
tae00330 Arginine and proline metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00030 Pentose phosphate pathway 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 16
tae00310 Lysine degradation 5
tae00640 Propanoate metabolism 4
tae00785 Lipoic acid metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 8
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
hvu01212 Fatty acid metabolism 2
hvu00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 6
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00640 Propanoate metabolism 3
sbi00785 Lipoic acid metabolism 3
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 5
bdi00330 Arginine and proline metabolism 3
bdi00410 beta-Alanine metabolism 3
bdi00640 Propanoate metabolism 2
bdi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101243918 102597786 107760662 107816158 827386 100526933 100306241 103833979 100259474 18094577 18096880 11406894 121224309 107939885 106411580 125575133 102616294 4330183 4330184 100284299 100193367 123127887 123144980 123144979 123401641 8073970 8073969 100843164 5717529 5727491
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