Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101244857  pentatricopeptide repeat-containing protein 
 sly-r.6  101244857  pentatricopeptide repeat-containing protein 
 ath-u.5  AT3G18020  Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5  106796792  pentatricopeptide repeat-containing protein At3g18020 
 vvi-u.5  100258348  pentatricopeptide repeat-containing protein At3g18020 
 ppo-u.5  7462491  pentatricopeptide repeat-containing protein At3g18020 
 mtr-u.5  11416962  pentatricopeptide repeat-containing protein At3g18020 
 osa-u.5  4344262  pentatricopeptide repeat-containing protein At3g18020 
 zma-u.5  103647935  pentatricopeptide repeat-containing protein At3g18020 

close


Top 50 coexpressed genes to 101244857 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101244857 (sly-u.5 coexpression data)

CoexMap"101244857"


slyLOC101244857 | Entrez gene ID : 101244857
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004236430.1 [sequence] [blastp]
XP_069151732.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  cyto_nucl 3  (predict for XP_004236430.1)
cyto 5,  chlo 3,  cyto_nucl 3  (predict for XP_069151732.1)
Subcellular
localization
TargetP
scret 7  (predict for XP_004236430.1)
scret 7  (predict for XP_069151732.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101244857


sly-r.6
for
101244857


ath-u.5
for
AT3G18020


gma-u.5
for
106796792


vvi-u.5
for
100258348


ppo-u.5
for
7462491


mtr-u.5
for
11416962


osa-u.5
for
4344262


zma-u.5
for
103647935



Ortholog ID: 12196
Species sly sot nta nta ath gma vvi ppo mtr bna bna cit osa zma tae hvu sbi bdi
Symbol LOC101244857 LOC102598679 LOC107805054 LOC107771852 AT3G18020 LOC106796792 LOC100258348 LOC7462491 LOC11416962 LOC106392069 LOC106422512 LOC102627267 LOC4344262 LOC103647935 LOC123051580 LOC123424743 LOC8078542 LOC112268962
Function* pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g18020 uncharacterized LOC107805054 uncharacterized LOC107771852 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020-like pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020 pentatricopeptide repeat-containing protein At3g18020
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 2
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101244857 102598679 107805054 107771852 821326 106796792 100258348 7462491 11416962 106392069 106422512 102627267 4344262 103647935 123051580 123424743 8078542 112268962
The preparation time of this page was 0.1 [sec].