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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245289   E3 ubiquitin-protein ligase RGLG3 
 sly-r.6   101245289   E3 ubiquitin-protein ligase RGLG3 
 ath-u.5   RGLG3   Copine (Calcium-dependent phospholipid-binding protein) family 
 gma-u.5   100813310   E3 ubiquitin-protein ligase RGLG3 
 gma-u.5   100791316   E3 ubiquitin-protein ligase RGLG3 
 gma-u.5   100776002   E3 ubiquitin-protein ligase RGLG3 
 vvi-u.5   100249896   E3 ubiquitin-protein ligase RGLG3 
 ppo-u.5   7466857   E3 ubiquitin-protein ligase RGLG3 
 ppo-u.5   7490167   E3 ubiquitin-protein ligase RGLG3 
 mtr-u.5   11418943   E3 ubiquitin-protein ligase RGLG3 
 osa-u.5   4325244   E3 ubiquitin-protein ligase RGLG3 
 zma-u.5   100501644   Copine (Calcium-dependent phospholipid-binding protein) family 

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Top 50 coexpressed genes to 101245289 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245289 (sly-u.5 coexpression data)

CoexMap"101245289"


slyLOC101245289 | Entrez gene ID : 101245289      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 2 1 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (334 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (331 genes)  IEA  
Protein XP_004247214.1 [sequence] [blastp]
XP_010326428.1 [sequence] [blastp]
XP_069144794.1 [sequence] [blastp]
XP_069144795.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cysk 2,  cyto 1,  vacu 1  (predict for XP_004247214.1)
nucl 6,  cysk 2,  cyto 1,  vacu 1  (predict for XP_010326428.1)
nucl 6,  cysk 2,  cyto 1,  vacu 1  (predict for XP_069144794.1)
nucl 6,  cysk 2,  cyto 1,  vacu 1  (predict for XP_069144795.1)
Subcellular
localization
TargetP
other 8  (predict for XP_004247214.1)
other 8  (predict for XP_010326428.1)
other 8  (predict for XP_069144794.1)
other 8  (predict for XP_069144795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245289
sly-r.6
for
101245289
ath-u.5
for
RGLG3
gma-u.5
for
100813310
gma-u.5
for
100791316
gma-u.5
for
100776002
vvi-u.5
for
100249896
ppo-u.5
for
7466857
ppo-u.5
for
7490167
mtr-u.5
for
11418943
osa-u.5
for
4325244
zma-u.5
for
100501644


Ortholog ID: 7774
Species sly sot nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC101245289 LOC102579642 LOC107783976 LOC107806658 RGLG3 LOC100791316 LOC100776002 LOC103873813 LOC103855220 LOC100249896 LOC7466857 LOC7490167 LOC11418943 LOC107948369 LOC107945398 LOC125574928 LOC125604753 LOC102611908 LOC4325244 LOC100501644 LOC123080813 LOC123072628 LOC123445587 LOC110434115 LOC100821907
Function* E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG1 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG3-like E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 Copine (Calcium-dependent phospholipid-binding protein) family E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3 E3 ubiquitin-protein ligase RGLG3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00030 Pentose phosphate pathway 2
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00270 Cysteine and methionine metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae00620 Pyruvate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245289 102579642 107783976 107806658 836518 100791316 100776002 103873813 103855220 100249896 7466857 7490167 11418943 107948369 107945398 125574928 125604753 102611908 4325244 100501644 123080813 123072628 123445587 110434115 100821907
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