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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245293   dihydrolipoyl dehydrogenase 2, chloroplastic 
 sly-r.6   101245293   dihydrolipoyl dehydrogenase 2, chloroplastic 
 sly-u.5   101246429   dihydrolipoyl dehydrogenase 1, chloroplastic 
 ath-u.5   LPD1   lipoamide dehydrogenase 1 
 ath-u.5   AT4G16155   dihydrolipoamide dehydrogenase 
 gma-u.5   100809578   dihydrolipoyl dehydrogenase 2, chloroplastic 
 gma-u.5   100803176   dihydrolipoyl dehydrogenase 2, chloroplastic 
 gma-u.5   100782004   dihydrolipoyl dehydrogenase 2, chloroplastic 
 vvi-u.5   100251123   dihydrolipoyl dehydrogenase 2, chloroplastic 
 vvi-u.5   100246616   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ppo-u.5   7485915   dihydrolipoyl dehydrogenase 2, chloroplastic 
 ppo-u.5   7489415   dihydrolipoyl dehydrogenase 2, chloroplastic 
 mtr-u.5   11422305   dihydrolipoyl dehydrogenase 1, chloroplastic 
 mtr-u.5   11408806   dihydrolipoyl dehydrogenase 1, chloroplastic 
 osa-u.5   4326849   dihydrolipoyl dehydrogenase 1, chloroplastic 
 osa-u.5   4337862   dihydrolipoyl dehydrogenase 1, chloroplastic 
 zma-u.5   100383599   uncharacterized LOC100383599 
 zma-u.5   100381818   dihydrolipoyl dehydrogenase 

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Top 50 coexpressed genes to 101245293 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245293 (sly-u.5 coexpression data)

CoexMap"101245293"


slyLOC101245293 | Entrez gene ID : 101245293      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00010 [list] [network] Glycolysis / Gluconeogenesis (133 genes)
sly00020 [list] [network] Citrate cycle (TCA cycle) (59 genes)
sly00260 [list] [network] Glycine, serine and threonine metabolism (67 genes)
sly00280 [list] [network] Valine, leucine and isoleucine degradation (67 genes)
sly00310 [list] [network] Lysine degradation (34 genes)
sly00380 [list] [network] Tryptophan metabolism (57 genes)
sly00620 [list] [network] Pyruvate metabolism (109 genes)
sly00630 [list] [network] Glyoxylate and dicarboxylate metabolism (81 genes)
sly00640 [list] [network] Propanoate metabolism (52 genes)
sly00670 [list] [network] One carbon pool by folate (40 genes)
sly00785 [list] [network] Lipoic acid metabolism (36 genes)
sly01200 [list] [network] Carbon metabolism (290 genes)
sly01210 [list] [network] 2-Oxocarboxylic acid metabolism (89 genes)
sly01240 [list] [network] Biosynthesis of cofactors (247 genes)
GO BP
GO CC
GO MF
GO:0004148 [list] [network] dihydrolipoyl dehydrogenase (NADH) activity  (4 genes)  IEA  
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (141 genes)  IEA  
Protein XP_004230295.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for XP_004230295.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004230295.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245293

.
sly-r.6
for
101245293

.
sly-u.5
for
101246429

.
ath-u.5
for
LPD1

.
ath-u.5
for
AT4G16155

.
gma-u.5
for
100809578

.
gma-u.5
for
100803176

.
gma-u.5
for
100782004

.
vvi-u.5
for
100251123

.
vvi-u.5
for
100246616

.
ppo-u.5
for
7485915

.
ppo-u.5
for
7489415

.
mtr-u.5
for
11422305

.
mtr-u.5
for
11408806

.
osa-u.5
for
4326849

.
osa-u.5
for
4337862

.
zma-u.5
for
100383599

.
zma-u.5
for
100381818

.


Ortholog ID: 4078
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol AT4G16155 LPD1 LOC100803176 LOC100809578 LOC101245293 LOC101246429 LOC4326849 LOC4337862 LOC100383599 LOC100381818 LOC103870046 LOC103859689 LOC100246616 LOC100251123 LOC7489415 LOC7485915 LOC11422305 LOC11408806 LOC123038214 LOC123180580 LOC123426077 LOC107926533 LOC107888950 LOC106439448 LOC106446625 CHLRE_01g016514v5 LOC8071187 LOC110433993 LOC102602804 LOC102599296 LOC102624649 LOC100826755 LOC100837564 LOC107802918 LOC107783795
Function* dihydrolipoamide dehydrogenase lipoamide dehydrogenase 1 dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic uncharacterized LOC100383599 dihydrolipoyl dehydrogenase dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic uncharacterized protein dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 1, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 1, chloroplastic-like dihydrolipoyl dehydrogenase 2, chloroplastic-like dihydrolipoyl dehydrogenase 1, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic dihydrolipoyl dehydrogenase 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01212 Fatty acid metabolism 10
ath00061 Fatty acid biosynthesis 9
ath01200 Carbon metabolism 9
ath01240 Biosynthesis of cofactors 8
ath00620 Pyruvate metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00620 Pyruvate metabolism 7
ath01200 Carbon metabolism 7
ath01240 Biosynthesis of cofactors 5
ath00010 Glycolysis / Gluconeogenesis 5
ath00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 10
gma01212 Fatty acid metabolism 10
gma01200 Carbon metabolism 9
gma00620 Pyruvate metabolism 8
gma00640 Propanoate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 8
gma01200 Carbon metabolism 8
gma00061 Fatty acid biosynthesis 7
gma01212 Fatty acid metabolism 7
gma00640 Propanoate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 11
sly01200 Carbon metabolism 11
sly00061 Fatty acid biosynthesis 9
sly01212 Fatty acid metabolism 9
sly00010 Glycolysis / Gluconeogenesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 2
sly00640 Propanoate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 8
osa01200 Carbon metabolism 8
osa00010 Glycolysis / Gluconeogenesis 7
osa00061 Fatty acid biosynthesis 6
osa01210 2-Oxocarboxylic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00620 Pyruvate metabolism 9
osa01200 Carbon metabolism 9
osa00010 Glycolysis / Gluconeogenesis 7
osa01212 Fatty acid metabolism 6
osa00061 Fatty acid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 9
zma00010 Glycolysis / Gluconeogenesis 8
zma00620 Pyruvate metabolism 8
zma00061 Fatty acid biosynthesis 7
zma00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 7
zma00061 Fatty acid biosynthesis 6
zma00780 Biotin metabolism 6
zma01212 Fatty acid metabolism 6
zma00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00061 Fatty acid biosynthesis 8
bra01212 Fatty acid metabolism 8
bra00620 Pyruvate metabolism 7
bra01200 Carbon metabolism 7
bra01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 8
bra01200 Carbon metabolism 8
bra00061 Fatty acid biosynthesis 6
bra01212 Fatty acid metabolism 5
bra00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00061 Fatty acid biosynthesis 8
vvi01212 Fatty acid metabolism 7
vvi00620 Pyruvate metabolism 6
vvi01200 Carbon metabolism 6
vvi01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 5
ppo00640 Propanoate metabolism 5
ppo01200 Carbon metabolism 5
ppo01240 Biosynthesis of cofactors 4
ppo00061 Fatty acid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00061 Fatty acid biosynthesis 10
ppo01212 Fatty acid metabolism 9
ppo00620 Pyruvate metabolism 8
ppo01200 Carbon metabolism 8
ppo01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00620 Pyruvate metabolism 12
mtr01200 Carbon metabolism 12
mtr00061 Fatty acid biosynthesis 10
mtr01212 Fatty acid metabolism 10
mtr00010 Glycolysis / Gluconeogenesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 8
mtr00061 Fatty acid biosynthesis 7
mtr01212 Fatty acid metabolism 7
mtr00620 Pyruvate metabolism 7
mtr01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 16
tae01200 Carbon metabolism 13
tae01212 Fatty acid metabolism 10
tae00010 Glycolysis / Gluconeogenesis 10
tae00020 Citrate cycle (TCA cycle) 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 16
tae01200 Carbon metabolism 13
tae00010 Glycolysis / Gluconeogenesis 10
tae01212 Fatty acid metabolism 8
tae00785 Lipoic acid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 5
hvu00010 Glycolysis / Gluconeogenesis 4
hvu00020 Citrate cycle (TCA cycle) 4
hvu00620 Pyruvate metabolism 4
hvu00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00620 Pyruvate metabolism 6
ghi01200 Carbon metabolism 6
ghi00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 15
bna01200 Carbon metabolism 15
bna00640 Propanoate metabolism 9
bna00010 Glycolysis / Gluconeogenesis 8
bna00061 Fatty acid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna01240 Biosynthesis of cofactors 7
bna00061 Fatty acid biosynthesis 6
bna01212 Fatty acid metabolism 6
bna00780 Biotin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 9
cre01200 Carbon metabolism 9
cre00061 Fatty acid biosynthesis 9
cre01212 Fatty acid metabolism 9
cre00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi00510 N-Glycan biosynthesis 6
sbi00513 Various types of N-glycan biosynthesis 6
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 8
sot01212 Fatty acid metabolism 8
sot00620 Pyruvate metabolism 7
sot01200 Carbon metabolism 7
sot01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
sot00640 Propanoate metabolism 2
sot01200 Carbon metabolism 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 10
cit00620 Pyruvate metabolism 9
cit00061 Fatty acid biosynthesis 7
cit01212 Fatty acid metabolism 7
cit00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00061 Fatty acid biosynthesis 7
bdi01212 Fatty acid metabolism 6
bdi00620 Pyruvate metabolism 5
bdi00020 Citrate cycle (TCA cycle) 4
bdi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta01200 Carbon metabolism 4
nta00020 Citrate cycle (TCA cycle) 2
nta00260 Glycine, serine and threonine metabolism 2
nta00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 10
nta00061 Fatty acid biosynthesis 8
nta00780 Biotin metabolism 8
nta01212 Fatty acid metabolism 8
nta00010 Glycolysis / Gluconeogenesis 7
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827307 820951 100803176 100809578 101245293 101246429 4326849 4337862 100383599 100381818 103870046 103859689 100246616 100251123 7489415 7485915 11422305 11408806 123038214 123180580 123426077 107926533 107888950 106439448 106446625 5715128 8071187 110433993 102602804 102599296 102624649 100826755 100837564 107802918 107783795
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