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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245796   ATP-dependent helicase BRM 
 sly-r.6   101245796   ATP-dependent helicase BRM 
 sly-m.5   101245796   ATP-dependent helicase BRM 
 ath-u.5   BRM   transcription regulatory protein SNF2 
 gma-u.5   100811608   ATP-dependent helicase BRM 
 gma-u.5   100807104   ATP-dependent helicase BRM 
 gma-u.5   100805894   ATP-dependent helicase BRM 
 vvi-u.5   100249945   ATP-dependent helicase BRM 
 ppo-u.5   7497210   ATP-dependent helicase BRM 
 ppo-u.5   7496980   ATP-dependent helicase BRM 
 mtr-u.5   11428961   ATP-dependent helicase BRM 
 mtr-u.5   11440396   ATP-dependent helicase BRM 
 osa-u.5   4328058   ATP-dependent helicase BRM 
 zma-u.5   100273430   uncharacterized LOC100273430 

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Top 50 coexpressed genes to 101245796 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245796 (sly-u.5 coexpression data)

CoexMap"101245796"


slyLOC101245796 | Entrez gene ID : 101245796      
Species sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 3 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03082 [list] [network] ATP-dependent chromatin remodeling (70 genes)
GO BP
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (133 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (54 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1916 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010326507.2 [sequence] [blastp]
XP_010326508.2 [sequence] [blastp]
XP_069144116.1 [sequence] [blastp]
XP_069144119.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto_nucl 3,  chlo 2,  pero 2  (predict for XP_010326507.2)
nucl 5,  cyto_nucl 3,  chlo 2,  pero 2  (predict for XP_010326508.2)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_069144116.1)
nucl 8,  cyto 1,  plas 1,  cysk 1,  cysk_plas 1,  cyto_plas 1  (predict for XP_069144119.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_010326507.2)
chlo 4,  other 3  (predict for XP_010326508.2)
other 7,  mito 4  (predict for XP_069144116.1)
other 7,  mito 4  (predict for XP_069144119.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245796
sly-r.6
for
101245796
sly-m.5
for
101245796
ath-u.5
for
BRM
gma-u.5
for
100811608
gma-u.5
for
100807104
gma-u.5
for
100805894
vvi-u.5
for
100249945
ppo-u.5
for
7497210
ppo-u.5
for
7496980
mtr-u.5
for
11428961
mtr-u.5
for
11440396
osa-u.5
for
4328058
zma-u.5
for
100273430


Ortholog ID: 5492
Species sly sot nta nta ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa zma tae tae hvu sbi bdi
Symbol LOC101245796 LOC102602770 LOC107788810 LOC107762744 BRM LOC100793092 LOC100805894 LOC103858197 LOC103866259 LOC100249945 LOC7496980 LOC7497210 LOC11440396 LOC11428961 LOC121219114 LOC107923790 LOC111202348 LOC106438266 LOC127901208 LOC102610032 LOC4328058 LOC100273430 LOC123131709 LOC123135553 LOC123401356 LOC8066511 LOC100833895
Function* ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM-like transcription regulatory protein SNF2 ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM-like ATP-dependent helicase BRM ATP-dependent helicase BRM uncharacterized LOC100273430 ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM ATP-dependent helicase BRM
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna03013 Nucleocytoplasmic transport 4
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 5
bna03013 Nucleocytoplasmic transport 4
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 8
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245796 102602770 107788810 107762744 819210 100793092 100805894 103858197 103866259 100249945 7496980 7497210 11440396 11428961 121219114 107923790 111202348 106438266 127901208 102610032 4328058 100273430 123131709 123135553 123401356 8066511 100833895
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