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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245941   probable E3 ubiquitin-protein ligase ARI2 
 sly-r.6   101245941   probable E3 ubiquitin-protein ligase ARI2 
 sly-u.5   101261665   probable E3 ubiquitin-protein ligase ARI2 
 ath-u.5   ARI2   RING/U-box superfamily protein 
 gma-u.5   ARI7   ariadne A subfamily protein ARI7 
 gma-u.5   100783343   probable E3 ubiquitin-protein ligase ARI2 
 vvi-u.5   100243709   probable E3 ubiquitin-protein ligase ARI2 
 vvi-u.5   100257215   probable E3 ubiquitin-protein ligase ARI2 
 ppo-u.5   7456399   probable E3 ubiquitin-protein ligase ARI2 
 mtr-u.5   25492703   probable E3 ubiquitin-protein ligase ARI1 
 osa-u.5   4332164   probable E3 ubiquitin-protein ligase ARI2 
 zma-u.5   103633066   probable E3 ubiquitin-protein ligase ARI2 
 zma-u.5   103639406   probable E3 ubiquitin-protein ligase ARI2 

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Top 50 coexpressed genes to 101245941 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245941 (sly-u.5 coexpression data)

CoexMap"101245941"


slyLOC101245941 | Entrez gene ID : 101245941      
Species sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (30 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (83 genes)  IEA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (283 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (148 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (27 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (194 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
Protein XP_004238212.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  pero 1  (predict for XP_004238212.2)
Subcellular
localization
TargetP
other 9  (predict for XP_004238212.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245941

.
sly-r.6
for
101245941

.
sly-u.5
for
101261665

.
ath-u.5
for
ARI2

.
gma-u.5
for
ARI7

.
gma-u.5
for
100783343

.
vvi-u.5
for
100243709

.
vvi-u.5
for
100257215

.
ppo-u.5
for
7456399

.
mtr-u.5
for
25492703

.
osa-u.5
for
4332164

.
zma-u.5
for
103633066

.
zma-u.5
for
103639406

.


Ortholog ID: 4035
Species gma gma sly sly osa zma zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol ARI7 LOC100783343 LOC101261665 LOC101245941 LOC4332164 LOC103639406 LOC103633066 LOC103846062 LOC100257215 LOC100243709 LOC7456399 LOC25492703 LOC123085110 LOC123098179 LOC123449254 LOC107942148 LOC107938877 LOC106390549 LOC106355227 CHLRE_17g721950v5 LOC8085265 LOC102591652 LOC102590644 LOC102617091 LOC102613837 LOC100836835 LOC107788888 LOC107779473
Function* ariadne A subfamily protein ARI7 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI1 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI1 uncharacterized protein probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI1 probable E3 ubiquitin-protein ligase ARI2 probable E3 ubiquitin-protein ligase ARI2 putative E3 ubiquitin-protein ligase ARI2 putative E3 ubiquitin-protein ligase ARI2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04626 Plant-pathogen interaction 2
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03022 Basal transcription factors 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 3
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808068 100783343 101261665 101245941 4332164 103639406 103633066 103846062 100257215 100243709 7456399 25492703 123085110 123098179 123449254 107942148 107938877 106390549 106355227 5722705 8085265 102591652 102590644 102617091 102613837 100836835 107788888 107779473
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