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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246090   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 sly-r.6   101246090   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 sly-m.5   101246090   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 ath-u.5   RGXT2   rhamnogalacturonan xylosyltransferase 2 
 ath-u.5   MGP4   Nucleotide-diphospho-sugar transferase family protein 
 ath-u.5   RGXT1   rhamnogalacturonan xylosyltransferase 1 
 gma-u.5   100775719   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 vvi-u.5   100249591   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 vvi-u.5   100244803   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 ppo-u.5   7492743   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 ppo-u.5   7457370   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 mtr-u.5   25493437   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 osa-u.5   4338659   UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 
 zma-u.5   100276040   UDP-D-xylose:L-fucose alpha-13-D-xylosyltransferase MGP4 

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Top 50 coexpressed genes to 101246090 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246090 (sly-u.5 coexpression data)

CoexMap"101246090"


slyLOC101246090 | Entrez gene ID : 101246090      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 3 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010306 [list] [network] rhamnogalacturonan II biosynthetic process  (1 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (494 genes)  IEA  
GO MF
GO:0035252 [list] [network] UDP-xylosyltransferase activity  (2 genes)  IEA  
Protein XP_004229961.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for XP_004229961.2)
Subcellular
localization
TargetP
chlo 5,  other 4  (predict for XP_004229961.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246090

.
sly-r.6
for
101246090

.
sly-m.5
for
101246090

.
ath-u.5
for
RGXT2

.
ath-u.5
for
MGP4

.
ath-u.5
for
RGXT1

.
gma-u.5
for
100775719

.
vvi-u.5
for
100249591

.
vvi-u.5
for
100244803

.
ppo-u.5
for
7492743

.
ppo-u.5
for
7457370

.
mtr-u.5
for
25493437

.
osa-u.5
for
4338659

.
zma-u.5
for
100276040

.


Ortholog ID: 3481
Species ath ath gma sly osa zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna sbi sot cit cit bdi nta nta
Symbol RGXT2 MGP4 LOC100775719 LOC101246090 LOC4338659 LOC100276040 LOC103862634 LOC100244803 LOC100249591 LOC7457370 LOC7492743 LOC25493437 LOC123130911 LOC123054182 LOC123448250 LOC123439866 LOC107887332 LOC107900926 LOC106395443 LOC8077954 LOC102591057 LOC127901184 LOC102628491 LOC100839509 LOC107824067 LOC107800014
Function* rhamnogalacturonan xylosyltransferase 2 Nucleotide-diphospho-sugar transferase family protein UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-13-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 uncharacterized LOC123054182 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase 3-like UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 3
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 2
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04142 Lysosome 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827905 828028 100775719 101246090 4338659 100276040 103862634 100244803 100249591 7457370 7492743 25493437 123130911 123054182 123448250 123439866 107887332 107900926 106395443 8077954 102591057 127901184 102628491 100839509 107824067 107800014
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