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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101246166   beta-amylase 3, chloroplastic 
 sly-r.6   101246166   beta-amylase 3, chloroplastic 
 sly-m.5   101246166   beta-amylase 3, chloroplastic 
 gma-u.5   100805981   beta-amylase 3, chloroplastic 
 gma-u.5   100787834   beta-amylase 1, chloroplastic 
 vvi-u.5   100258256   beta-amylase 1, chloroplastic 
 ppo-u.5   7465329   beta-amylase 1, chloroplastic 
 ppo-u.5   7467061   beta-amylase 1, chloroplastic 
 mtr-u.5   25502228   beta-amylase 3, chloroplastic 
 osa-u.5   9268236   beta-amylase 1, chloroplastic-like 
 zma-u.5   100192000   beta amylase4 
 zma-u.5   100194176   Beta-amylase 3 chloroplastic 

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Top 50 coexpressed genes to 101246166 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101246166 (sly-u.5 coexpression data)

CoexMap"101246166"


slyLOC101246166 | Entrez gene ID : 101246166    
Species sly gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi sot tae ath bna ghi
Paralog 3 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00500 [list] [network] Starch and sucrose metabolism (146 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (57 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (8 genes)  IEA  
Protein XP_004245482.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for XP_004245482.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004245482.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101246166

.
sly-r.6
for
101246166

.
sly-m.5
for
101246166

.
gma-u.5
for
100805981

.
gma-u.5
for
100787834

.
vvi-u.5
for
100258256

.
ppo-u.5
for
7465329

.
ppo-u.5
for
7467061

.
mtr-u.5
for
25502228

.
osa-u.5
for
9268236

.
zma-u.5
for
100192000

.
zma-u.5
for
100194176

.


Ortholog ID: 12335
Species gma gma sly osa zma zma vvi ppo ppo mtr tae tae hvu sbi sot cit bdi nta nta
Symbol LOC100805981 LOC100787834 LOC101246166 LOC9268236 LOC100192000 LOC100194176 LOC100258256 LOC7467061 LOC7465329 LOC25502228 LOC123077920 LOC123060843 LOC123443292 LOC8077549 LOC102598794 LOC102622262 LOC100839500 LOC107805468 LOC107760458
Function* beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic-like beta amylase4 Beta-amylase 3 chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic-like beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic-like beta-amylase 1, chloroplastic-like beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00860 Porphyrin metabolism 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
zma00051 Fructose and mannose metabolism 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma00541 Biosynthesis of various nucleotide sugars 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo00785 Lipoic acid metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 3
sot04814 Motor proteins 2
sot03013 Nucleocytoplasmic transport 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100805981 100787834 101246166 9268236 100192000 100194176 100258256 7467061 7465329 25502228 123077920 123060843 123443292 8077549 102598794 102622262 100839500 107805468 107760458
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